Difference between revisions of "TSS:Hg 112905.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:9250 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=36 | |distance=36 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-52 |
|end=7513963 | |end=7513963 | ||
|end_of_center_position=7513948 | |end_of_center_position=7513948 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| − | |num_trans= | + | |num_trans=8495 |
|species=human | |species=human | ||
|start=7513931 | |start=7513931 | ||
|start_of_center_position=7513947 | |start_of_center_position=7513947 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK308398 AK001131 | + | |transcript_name=ENST00000299492.9 AK308398 AK001131 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112905.1 | |tss_id=hg_112905.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B3KM46 | + | |uniprot_id=B3KM46 Q8ND30 |
}} | }} | ||
Latest revision as of 22:13, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 7513947 |
|---|---|
| End of the center position in the TSS region: | 7513948 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000299492.9 AK308398 AK001131 |
|---|---|
| Distance: | 36 |
| Num_trans: | 8495 |
| All_trans: | HGNC:9250 |
TATA-Box annotation
| Distance to TSS: | -52 |
|---|---|
| Nearest PromoterID: | NM_003621 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
