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Difference between revisions of "TSS:Hg 118475.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000436351.2:154 uc057yqh.1:154 AK308543:-223 ENST00000533558.5:-255 uc009yfk.4:-255 AK290102:-255 ENST00000525307.1:-258 uc057yqi.1:-258 ENST00000527542.5:-265 uc057yqe.1:-265 ENST00000531096.5:-290 NM_001302826:-290 uc057yqd.1:-290 NM_016229:326 NR_126508:326 ENST00000299498.10:423 uc001mfm.4:423 AF169802:423 ENST00000524790.5:452 uc057ypx.1:452 BC001346:452 ENST00000526084.1:469 uc057ypz.1:469 AB209000:469
+
|all_trans=LF207839:43 MA443416:43 ENST00000436351.2:154 AK308543:-223 ENST00000533558.5:-255 AK290102:-255 ENST00000525307.1:-258 ENST00000527542.5:-265 ENST00000531096.5:-290 NM_001302826:-314 AF169802:423 ENST00000299498.11:424 NR_126508:424 NM_016229:424 ENST00000524790.5:452 BC001346:452 ENST00000526084.1:469 AB209000:469
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.11
 
|cpg_percent=0.11
|distance=154
+
|distance=43
|distance_to_tss=305
+
|distance_to_tss=329
 
|end=7673953
 
|end=7673953
 
|end_of_center_position=7673939
 
|end_of_center_position=7673939
Line 12: Line 12:
 
|gene_description=cytochrome b5 reductase 2
 
|gene_description=cytochrome b5 reductase 2
 
|gene_id=51700
 
|gene_id=51700
|gene_name=cytochrome b5 reductase 2
+
|gene_name=CYB5R2
 
|gene_source=HGNC:24376
 
|gene_source=HGNC:24376
 
|gene_symbol=CYB5R2
 
|gene_symbol=CYB5R2
Line 22: Line 22:
 
|nearest_refseq=NM_016229
 
|nearest_refseq=NM_016229
 
|nearest_unigene=Hs.414362
 
|nearest_unigene=Hs.414362
|num_trans=24
+
|num_trans=18
 
|species=human
 
|species=human
 
|start=7673923
 
|start=7673923
 
|start_of_center_position=7673938
 
|start_of_center_position=7673938
 
|strand=-
 
|strand=-
|transcript_name=ENST00000436351.2 uc057yqh.1
+
|transcript_name=LF207839 MA443416
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_118475.1
 
|tss_id=hg_118475.1

Latest revision as of 23:16, 15 June 2021

Basic information about the TSS


TSS ID:hg_118475.1
Species:human
Chr:chr11
TSS Classification:yes
Start:7673923
End:7673953
Strand:-
TSS Score:1
Start of the center position in the TSS region:7673938
End of the center position in the TSS region:7673939



Gene and protein annotation


Transcript_name:LF207839 MA443416
Distance:43
GeneID:51700
HGNC/MGI_ID:HGNC:24376
UniProt_ID:E9PRM4
Gene_name:CYB5R2
Gene_symbol:CYB5R2
Gene_synonyms:
Gene_source:HGNC:24376



Transcript annotation


Transcript_name:LF207839 MA443416
Distance:43
Num_trans:18
All_trans:LF207839:43 MA443416:43 ENST00000436351.2:154 AK308543:-223 ENST00000533558.5:-255 AK290102:-255 ENST00000525307.1:-258 ENST00000527542.5:-265 ENST00000531096.5:-290 NM_001302826:-314 AF169802:423 ENST00000299498.11:424 NR_126508:424 NM_016229:424 ENST00000524790.5:452 BC001346:452 ENST00000526084.1:469 AB209000:469



TATA-Box annotation


Distance to TSS:329
Nearest PromoterID:NM_001302826
Entrez ID:51700
Nearest Unigene:Hs.414362
Nearest Refseq:NM_016229
Nearest Ensembl:ENSG00000166394
Gene Name:CYB5R2
Gene Alias:B5R.2
Gene Description:cytochrome b5 reductase 2
Gene Type:protein-coding
CpG%:0.11
GC%:0.756219
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):