Difference between revisions of "TSS:Hg 238112.1"
From referenceTSS
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|HH0048= | |HH0048= | ||
|KLP-11= | |KLP-11= | ||
| − | |all_trans= | + | |all_trans=HGNC:16234 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=13 |
|distance_to_tss=32048 | |distance_to_tss=32048 | ||
| − | |end= | + | |end=57525592 |
|end_of_center_position=57525592 | |end_of_center_position=57525592 | ||
|entrez_id=9371 | |entrez_id=9371 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=FLA8 | + | |gene_alias=FLA8{{!}}HH0048{{!}}KLP-11 |
|gene_description=kinesin family member 3B | |gene_description=kinesin family member 3B | ||
| − | |gene_id= | + | |gene_id=140690 |
| − | |gene_name= | + | |gene_name=CCCTC-binding factor like |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:16234 |
| − | |gene_symbol= | + | |gene_symbol=CTCFL |
| − | |gene_synonyms= | + | |gene_synonyms=BORIS CT27 dJ579F20.2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:16234 |
|nearest_ensembl=ENSG00000101350 | |nearest_ensembl=ENSG00000101350 | ||
|nearest_promoter_id=NM_004798 | |nearest_promoter_id=NM_004798 | ||
|nearest_refseq=NM_004798 | |nearest_refseq=NM_004798 | ||
|nearest_unigene=Hs.369670 | |nearest_unigene=Hs.369670 | ||
| − | |num_trans= | + | |num_trans=140690 |
|species=human | |species=human | ||
| − | |start= | + | |start=57525591 |
|start_of_center_position=57525591 | |start_of_center_position=57525591 | ||
| − | |strand= | + | |strand=- |
| − | |transcript_name= | + | |transcript_name=ENST00000371196.6 AY071919 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_238112.1 | |tss_id=hg_238112.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8NI51 |
}} | }} | ||
Latest revision as of 13:14, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 57525591 |
|---|---|
| End of the center position in the TSS region: | 57525592 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000371196.6 AY071919 |
|---|---|
| Distance: | 13 |
| Num_trans: | 140690 |
| All_trans: | HGNC:16234 |
TATA-Box annotation
| Distance to TSS: | 32048 |
|---|---|
| Nearest PromoterID: | NM_004798 |
| Entrez ID: | 9371 |
| Nearest Unigene: | Hs.369670 |
| Nearest Refseq: | NM_004798 |
| Nearest Ensembl: | ENSG00000101350 |
| Gene Name: | CCCTC-binding factor like |
| Gene Alias: | FLA8|HH0048|KLP-11 |
| Gene Description: | kinesin family member 3B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
