Difference between revisions of "TSS:Hg 233735.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 7: | Line 7: | ||
|NS1BP= | |NS1BP= | ||
|all_trans=AK023020:-89 ENST00000367497.1:91 uc057nyb.1:91 | |all_trans=AK023020:-89 ENST00000367497.1:91 uc057nyb.1:91 | ||
| − | |chr= | + | |chr=chr11 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=6025 |
| − | |end= | + | |end=9118718 |
|end_of_center_position=9118717 | |end_of_center_position=9118717 | ||
|entrez_id=10625 | |entrez_id=10625 | ||
|gc_percent=0.38806 | |gc_percent=0.38806 | ||
| − | |gene_alias=FLARA3 | + | |gene_alias=ARA3{{!}}FLARA3{{!}}HSPC068{{!}}KLHL39{{!}}ND1{{!}}NS-1{{!}}NS1-BP{{!}}NS1BP |
|gene_description=influenza virus NS1A binding protein | |gene_description=influenza virus NS1A binding protein | ||
|gene_id=10625 | |gene_id=10625 | ||
| − | |gene_name= | + | |gene_name=IVNS1ABP |
|gene_source=HGNC:16951 | |gene_source=HGNC:16951 | ||
|gene_symbol=IVNS1ABP | |gene_symbol=IVNS1ABP | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_006469 | |nearest_refseq=NM_006469 | ||
|nearest_unigene=Hs.497183 | |nearest_unigene=Hs.497183 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=9118715 |
|start_of_center_position=9118716 | |start_of_center_position=9118716 | ||
| − | |strand= | + | |strand=+ |
| − | |tata_box= | + | |tata_box=-63(GCTTTTAAGGAC,+,0.00) |
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233735.1 | |tss_id=hg_233735.1 | ||
Latest revision as of 09:07, 14 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 9118716 |
|---|---|
| End of the center position in the TSS region: | 9118717 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AK023020:-89 ENST00000367497.1:91 uc057nyb.1:91 |
TATA-Box annotation
| Distance to TSS: | 6025 |
|---|---|
| Nearest PromoterID: | NM_006469 |
| Entrez ID: | 10625 |
| Nearest Unigene: | Hs.497183 |
| Nearest Refseq: | NM_006469 |
| Nearest Ensembl: | ENSG00000116679 |
| Gene Name: | IVNS1ABP |
| Gene Alias: | ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP |
| Gene Description: | influenza virus NS1A binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.38806 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -63(GCTTTTAAGGAC,+,0.00) |
