Difference between revisions of "TSS:Hg 107370.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=42 |entrez_id=196051 |gc_percent=0.810945 |gene_alias=DPPL2|PPAPDC1|PPAPDC1A |gene_description=phospholipid phosphatase 4 |gene_...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PPAPDC1= | ||
| + | |PPAPDC1A= | ||
| + | |all_trans=NR_134516:-40 NM_001318169:-40 NM_001318168:-40 NM_001318167:-40 NM_001318166:-40 BC101267:73 BC101269:73 BC122535:73 BC101268:73 BC132787:133 ENST00000398250.6:229 NM_001030059:229 AK296273:249 HQ258170:303 KJ895775:303 KJ903972:303 AK310178:305 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=-40 | ||
|distance_to_tss=42 | |distance_to_tss=42 | ||
| + | |end=120456998 | ||
| + | |end_of_center_position=120456996 | ||
|entrez_id=196051 | |entrez_id=196051 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=DPPL2 | + | |gene_alias=DPPL2{{!}}PPAPDC1{{!}}PPAPDC1A |
|gene_description=phospholipid phosphatase 4 | |gene_description=phospholipid phosphatase 4 | ||
| − | |gene_name=PLPP4 | + | |gene_id=196051 |
| + | |gene_name=phospholipid phosphatase 4 | ||
| + | |gene_source=HGNC:23531 | ||
| + | |gene_symbol=PLPP4 | ||
| + | |gene_synonyms=DPPL2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23531 | ||
|nearest_ensembl=ENSG00000203805 | |nearest_ensembl=ENSG00000203805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001030059 |
|nearest_refseq=NM_001030059 | |nearest_refseq=NM_001030059 | ||
|nearest_unigene=Hs.40479 | |nearest_unigene=Hs.40479 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=120456993 | ||
| + | |start_of_center_position=120456995 | ||
| + | |strand=+ | ||
| + | |transcript_name=NR_134516.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107370.1 | |tss_id=hg_107370.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VZY2 | ||
}} | }} | ||
Latest revision as of 20:13, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120456995 |
|---|---|
| End of the center position in the TSS region: | 120456996 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_134516.1 |
|---|---|
| Distance: | -40 |
| Num_trans: | 17 |
| All_trans: | NR_134516:-40 NM_001318169:-40 NM_001318168:-40 NM_001318167:-40 NM_001318166:-40 BC101267:73 BC101269:73 BC122535:73 BC101268:73 BC132787:133 ENST00000398250.6:229 NM_001030059:229 AK296273:249 HQ258170:303 KJ895775:303 KJ903972:303 AK310178:305 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_001030059 |
| Entrez ID: | 196051 |
| Nearest Unigene: | Hs.40479 |
| Nearest Refseq: | NM_001030059 |
| Nearest Ensembl: | ENSG00000203805 |
| Gene Name: | phospholipid phosphatase 4 |
| Gene Alias: | DPPL2|PPAPDC1|PPAPDC1A |
| Gene Description: | phospholipid phosphatase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
