Difference between revisions of "TSS:Hg 100541.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |CTACK= | ||
| + | |CTAK= | ||
| + | |ESKINE= | ||
| + | |ILC= | ||
| + | |PESKY= | ||
| + | |SCYA27= | ||
| + | |all_trans=HGNC:10626 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=0 | ||
| + | |end=34662659 | ||
| + | |end_of_center_position=34662657 | ||
|entrez_id=10850 | |entrez_id=10850 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=ALP | + | |gene_alias=ALP{{!}}CTACK{{!}}CTAK{{!}}ESKINE{{!}}ILC{{!}}PESKY{{!}}SCYA27 |
|gene_description=C-C motif chemokine ligand 27 | |gene_description=C-C motif chemokine ligand 27 | ||
| − | |gene_name=CCL27 | + | |gene_id=10850 |
| + | |gene_name=C-C motif chemokine ligand 27 | ||
| + | |gene_source=HGNC:10626 | ||
| + | |gene_symbol=CCL27 | ||
| + | |gene_synonyms=ALP CTACK CTAK ESkine ILC PESKY skinkine | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10626 | ||
|nearest_ensembl=ENSG00000213927 | |nearest_ensembl=ENSG00000213927 | ||
|nearest_promoter_id=NM_006664 | |nearest_promoter_id=NM_006664 | ||
|nearest_refseq=NM_006664 | |nearest_refseq=NM_006664 | ||
|nearest_unigene=Hs.648124 | |nearest_unigene=Hs.648124 | ||
| + | |num_trans=10850 | ||
| + | |species=human | ||
| + | |start=34662654 | ||
| + | |start_of_center_position=34662656 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000259631.5 AJ243542 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100541.1 | |tss_id=hg_100541.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VZ77 Q9Y4X3 | ||
}} | }} | ||
Latest revision as of 17:45, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34662656 |
|---|---|
| End of the center position in the TSS region: | 34662657 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000259631.5 AJ243542 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10850 |
| All_trans: | HGNC:10626 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_006664 |
| Entrez ID: | 10850 |
| Nearest Unigene: | Hs.648124 |
| Nearest Refseq: | NM_006664 |
| Nearest Ensembl: | ENSG00000213927 |
| Gene Name: | C-C motif chemokine ligand 27 |
| Gene Alias: | ALP|CTACK|CTAK|ESKINE|ILC|PESKY|SCYA27 |
| Gene Description: | C-C motif chemokine ligand 27 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
