Difference between revisions of "TSS:Hg 115561.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|GLNN= | |GLNN= | ||
|GMAP= | |GMAP= | ||
| − | |all_trans= | + | |all_trans=HGNC:4114 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=68684551 | |end=68684551 | ||
|end_of_center_position=68684543 | |end_of_center_position=68684543 | ||
|entrez_id=51083 | |entrez_id=51083 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias=ETL8 | + | |gene_alias=ETL8{{!}}GAL-GMAP{{!}}GALN{{!}}GLNN{{!}}GMAP |
|gene_description=galanin and GMAP prepropeptide | |gene_description=galanin and GMAP prepropeptide | ||
|gene_id=51083 | |gene_id=51083 | ||
| − | |gene_name=galanin | + | |gene_name=galanin and GMAP prepropeptide |
|gene_source=HGNC:4114 | |gene_source=HGNC:4114 | ||
|gene_symbol=GAL | |gene_symbol=GAL | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_015973 | |nearest_refseq=NM_015973 | ||
|nearest_unigene=Hs.278959 | |nearest_unigene=Hs.278959 | ||
| − | |num_trans= | + | |num_trans=51083 |
|species=human | |species=human | ||
|start=68684534 | |start=68684534 | ||
|start_of_center_position=68684542 | |start_of_center_position=68684542 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-32(GCATATATAGCA,+,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000265643.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_115561.1 | |tss_id=hg_115561.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P22466 |
}} | }} | ||
Latest revision as of 23:11, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 68684542 |
|---|---|
| End of the center position in the TSS region: | 68684543 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265643.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 51083 |
| All_trans: | HGNC:4114 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_015973 |
| Entrez ID: | 51083 |
| Nearest Unigene: | Hs.278959 |
| Nearest Refseq: | NM_015973 |
| Nearest Ensembl: | ENSG00000069482 |
| Gene Name: | galanin and GMAP prepropeptide |
| Gene Alias: | ETL8|GAL-GMAP|GALN|GLNN|GMAP |
| Gene Description: | galanin and GMAP prepropeptide |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCATATATAGCA,+,0.00) |
