Difference between revisions of "TSS:Hg 233594.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AK294569:-2 | |all_trans=AK294569:-2 | ||
| − | |chr= | + | |chr=chr11 |
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=8117 |
| − | |end= | + | |end=72039783 |
|end_of_center_position=72039782 | |end_of_center_position=72039782 | ||
|entrez_id=55732 | |entrez_id=55732 | ||
| Line 12: | Line 12: | ||
|gene_description=chromosome 1 open reading frame 112 | |gene_description=chromosome 1 open reading frame 112 | ||
|gene_id=55732 | |gene_id=55732 | ||
| − | |gene_name= | + | |gene_name=C1orf112 |
|gene_source=HGNC:25565 | |gene_source=HGNC:25565 | ||
|gene_symbol=C1orf112 | |gene_symbol=C1orf112 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:25565 | |hgnc_mgi_id=HGNC:25565 | ||
|nearest_ensembl=ENSG00000000460 | |nearest_ensembl=ENSG00000000460 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001366768 |
|nearest_refseq=NM_018186 | |nearest_refseq=NM_018186 | ||
|nearest_unigene=Hs.443551 | |nearest_unigene=Hs.443551 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=72039780 |
|start_of_center_position=72039781 | |start_of_center_position=72039781 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233594.1 | |tss_id=hg_233594.1 | ||
Latest revision as of 09:04, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 72039781 |
|---|---|
| End of the center position in the TSS region: | 72039782 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | AK294569:-2 |
TATA-Box annotation
| Distance to TSS: | 8117 |
|---|---|
| Nearest PromoterID: | NM_001366768 |
| Entrez ID: | 55732 |
| Nearest Unigene: | Hs.443551 |
| Nearest Refseq: | NM_018186 |
| Nearest Ensembl: | ENSG00000000460 |
| Gene Name: | C1orf112 |
| Gene Alias: | - |
| Gene Description: | chromosome 1 open reading frame 112 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
