Difference between revisions of "TSS:Hg 121140.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:8059 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_104178 | |nearest_refseq=NR_104178 | ||
|nearest_unigene=Hs.713607 | |nearest_unigene=Hs.713607 | ||
| − | |num_trans= | + | |num_trans=4926 |
|species=human | |species=human | ||
|start=72041945 | |start=72041945 | ||
|start_of_center_position=72041960 | |start_of_center_position=72041960 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-65(CCCCATAAATGC,-,0.00) |
| − | |transcript_name=ENST00000537930.5 | + | |transcript_name=ENST00000537930.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_121140.1 | |tss_id=hg_121140.1 | ||
Latest revision as of 01:13, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 72041960 |
|---|---|
| End of the center position in the TSS region: | 72041961 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000537930.5 |
|---|---|
| Distance: | 154 |
| Num_trans: | 4926 |
| All_trans: | HGNC:8059 |
TATA-Box annotation
| Distance to TSS: | 27670 |
|---|---|
| Nearest PromoterID: | NR_104178 |
| Entrez ID: | 100128494 |
| Nearest Unigene: | Hs.713607 |
| Nearest Refseq: | NR_104178 |
| Nearest Ensembl: | ENSG00000251143 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128494 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -65(CCCCATAAATGC,-,0.00) |
