Difference between revisions of "TSS:Hg 100555.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:49846 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
| + | |end=34989383 | ||
| + | |end_of_center_position=34989377 | ||
|entrez_id=101926900 | |entrez_id=101926900 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=- | + | |gene_alias=DNAJB5-AS1 |
| − | |gene_description=DNAJB5 | + | |gene_description=DNAJB5 divergent transcript |
| − | |gene_name=DNAJB5- | + | |gene_id=101926900 |
| + | |gene_name=DNAJB5 divergent transcript | ||
| + | |gene_source=HGNC:49846 | ||
| + | |gene_symbol=DNAJB5-DT | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:49846 | ||
|nearest_ensembl=ENSG00000281491 | |nearest_ensembl=ENSG00000281491 | ||
|nearest_promoter_id=NR_109756 | |nearest_promoter_id=NR_109756 | ||
|nearest_refseq=NR_109756 | |nearest_refseq=NR_109756 | ||
|nearest_unigene=Hs.545814 | |nearest_unigene=Hs.545814 | ||
| − | |tata_box= | + | |num_trans=101926900 |
| + | |species=human | ||
| + | |start=34989369 | ||
| + | |start_of_center_position=34989376 | ||
| + | |strand=- | ||
| + | |tata_box=89(CAGCCTTAAAGG,-,0.00) | ||
| + | |transcript_name=ENST00000626300.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100555.1 | |tss_id=hg_100555.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:46, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34989376 |
|---|---|
| End of the center position in the TSS region: | 34989377 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000626300.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 101926900 |
| All_trans: | HGNC:49846 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NR_109756 |
| Entrez ID: | 101926900 |
| Nearest Unigene: | Hs.545814 |
| Nearest Refseq: | NR_109756 |
| Nearest Ensembl: | ENSG00000281491 |
| Gene Name: | DNAJB5 divergent transcript |
| Gene Alias: | DNAJB5-AS1 |
| Gene Description: | DNAJB5 divergent transcript |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 89(CAGCCTTAAAGG,-,0.00) |
