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Difference between revisions of "TSS:Hg 42216.1"

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|MSCCA=
 
|MSCCA=
 
|PRO2195=
 
|PRO2195=
−
|all_trans=ENST00000430182.5:0 ENST00000414533.5:0 ENST00000635443.1:0 ENST00000494767.2:0 ENST00000470619.6:0 ENST00000452739.5:0 ENST00000634802.1:0 ENST00000634602.1:0 ENST00000635052.1:0 ENST00000635194.1:0 ENST00000418549.3:0 ENST00000417025.2:0 ENST00000634609.1:0 ENST00000635494.1:0 ENST00000634953.1:0 ENST00000634724.1:0 ENST00000635278.1:0 ENST00000482438.2:0 uc062jqe.1:0 uc011bce.4:0 uc062jqp.1:0 uc062jqt.1:0 uc062jqu.1:0 uc062jqv.1:0 AK297987:0 AK056815:0 AK290523:0 AK301559:0 AK222510:0 AK300220:0 ENST00000635231.1:-1 BC029739:7 BC000394:8 X76013:8 BC001567:10 JF432294:13 AB385024:13 CU674766:13 uc062jqq.1:17 ENST00000482261.7:-47 JN104585:-99 ENST00000464962.6:214 ENST00000635375.1:214 ENST00000635541.1:235 uc062jqg.1:235 AK293260:235 ENST00000635292.1:284 ENST00000634425.1:302 ENST00000635622.1:-309 uc003cvx.5:-309 uc062jqr.1:-309 BC016634:330 ENST00000479495.5:-339 uc062jqs.1:-339 ENST00000634359.1:-343 ENST00000635501.1:-361 AK302867:-361 NR_073590:-367 NM_005051:-367 NM_001272073:-367 ENST00000634527.1:-368 ENST00000306125.11:-373
+
|all_trans=HGNC:9751
 
|chr=chr3
 
|chr=chr3
 
|cpg_percent=0.06
 
|cpg_percent=0.06
 
|distance=0
 
|distance=0
−
|distance_to_tss=375
+
|distance_to_tss=3
 
|end=49104762
 
|end=49104762
 
|end_of_center_position=49104754
 
|end_of_center_position=49104754
 
|entrez_id=5859
 
|entrez_id=5859
 
|gc_percent=0.597015
 
|gc_percent=0.597015
−
|gene_alias=GLNRS
+
|gene_alias=GLNRS{{!}}MSCCA{{!}}PRO2195
 
|gene_description=glutaminyl-tRNA synthetase
 
|gene_description=glutaminyl-tRNA synthetase
 
|gene_id=5859
 
|gene_id=5859
−
|gene_name=glutaminyl-tRNA synthetase
+
|gene_name=glutaminyl-tRNA synthetase 1
 
|gene_source=HGNC:9751
 
|gene_source=HGNC:9751
−
|gene_symbol=QARS
+
|gene_symbol=QARS1
 
|gene_synonyms=
 
|gene_synonyms=
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:9751
 
|hgnc_mgi_id=HGNC:9751
 
|nearest_ensembl=ENSG00000172053
 
|nearest_ensembl=ENSG00000172053
−
|nearest_promoter_id=NM_005051
+
|nearest_promoter_id=NR_073590
 
|nearest_refseq=NM_005051
 
|nearest_refseq=NM_005051
 
|nearest_unigene=Hs.79322
 
|nearest_unigene=Hs.79322
−
|num_trans=62
+
|num_trans=5859
 
|species=human
 
|species=human
 
|start=49104745
 
|start=49104745
 
|start_of_center_position=49104753
 
|start_of_center_position=49104753
 
|strand=-
 
|strand=-
−
|transcript_name=ENST00000430182.5 ENST00000414533.5 ENST00000635443.1 ENST00000494767.2 ENST00000470619.6 ENST00000452739.5 ENST00000634802.1 ENST00000634602.1 ENST00000635052.1 ENST00000635194.1 ENST00000418549.3 ENST00000417025.2 ENST00000634609.1 ENST00000635494.1 ENST00000634953.1 ENST00000634724.1 ENST00000635278.1 ENST00000482438.2 uc062jqe.1 uc011bce.4 uc062jqp.1 uc062jqt.1 uc062jqu.1 uc062jqv.1 AK297987 AK056815 AK290523 AK301559 AK222510 AK300220
+
|transcript_name=ENST00000306125.12 ENST00000430182.5 ENST00000414533.5 ENST00000635443.1 ENST00000494767.2 ENST00000470619.6 ENST00000452739.5 ENST00000634802.1 ENST00000634602.1 ENST00000635052.1 ENST00000635194.1 ENST00000418549.3 ENST00000417025.2 ENST00000634609.1 ENST00000635494.1 ENST00000634953.1 ENST00000634724.1 ENST00000635278.1 ENST00000482438.2 AK297987 AK056815 AK290523 AK301559 AK222510 AK300220
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_42216.1
 
|tss_id=hg_42216.1
 
|tss_score=1
 
|tss_score=1
−
|uniprot_id=A8K3A8 B4DNN3 B4DTH6 C9J165 F2Z2V6 P47897 Q53HS0
+
|uniprot_id=A0A0U1RQC3 A0A0U1RQE9 A0A0U1RQM8 A0A0U1RQT0 A0A0U1RQU2 A8K3A8 B4DNN3 B4DTH6 C9J165 F2Z2V6 P47897 Q53HS0
 
}}
 
}}

Latest revision as of 21:49, 21 July 2021

Basic information about the TSS

TSS ID:hg_42216.1
Species:human
Chr:chr3
TSS Classification:yes
Start:49104745
End:49104762
Strand:-
TSS Score:1
Start of the center position in the TSS region:49104753
End of the center position in the TSS region:49104754



Gene and protein annotation

Transcript_name:ENST00000306125.12 ENST00000430182.5 ENST00000414533.5 ENST00000635443.1 ENST00000494767.2 ENST00000470619.6 ENST00000452739.5 ENST00000634802.1 ENST00000634602.1 ENST00000635052.1 ENST00000635194.1 ENST00000418549.3 ENST00000417025.2 ENST00000634609.1 ENST00000635494.1 ENST00000634953.1 ENST00000634724.1 ENST00000635278.1 ENST00000482438.2 AK297987 AK056815 AK290523 AK301559 AK222510 AK300220
Distance:0
GeneID:5859
HGNC/MGI_ID:HGNC:9751
UniProt_ID:A0A0U1RQC3 A0A0U1RQE9 A0A0U1RQM8 A0A0U1RQT0 A0A0U1RQU2 A8K3A8 B4DNN3 B4DTH6 C9J165 F2Z2V6 P47897 Q53HS0
Gene_name:glutaminyl-tRNA synthetase 1
Gene_symbol:QARS1
Gene_synonyms:
Gene_source:HGNC:9751



Transcript annotation

Transcript_name:ENST00000306125.12 ENST00000430182.5 ENST00000414533.5 ENST00000635443.1 ENST00000494767.2 ENST00000470619.6 ENST00000452739.5 ENST00000634802.1 ENST00000634602.1 ENST00000635052.1 ENST00000635194.1 ENST00000418549.3 ENST00000417025.2 ENST00000634609.1 ENST00000635494.1 ENST00000634953.1 ENST00000634724.1 ENST00000635278.1 ENST00000482438.2 AK297987 AK056815 AK290523 AK301559 AK222510 AK300220
Distance:0
Num_trans:5859
All_trans:HGNC:9751



TATA-Box annotation

Distance to TSS:3
Nearest PromoterID:NR_073590
Entrez ID:5859
Nearest Unigene:Hs.79322
Nearest Refseq:NM_005051
Nearest Ensembl:ENSG00000172053
Gene Name:glutaminyl-tRNA synthetase 1
Gene Alias:GLNRS|MSCCA|PRO2195
Gene Description:glutaminyl-tRNA synthetase
Gene Type:protein-coding
CpG%:0.06
GC%:0.597015
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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