Difference between revisions of "TSS:Mm 67948.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|Slc25a9= | |Slc25a9= | ||
|UCP-3= | |UCP-3= | ||
| − | |all_trans= | + | |all_trans=MGI:3642592 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 11: | Line 11: | ||
|entrez_id=22229 | |entrez_id=22229 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=AI645527 | + | |gene_alias=AI645527{{!}}Slc25a9{{!}}UCP-3 |
| − | |gene_description= | + | |gene_description=uncoupling protein 3 (mitochondrial, proton carrier) |
|gene_id=100038497 | |gene_id=100038497 | ||
|gene_name=predicted gene 10603 | |gene_name=predicted gene 10603 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_009464 | |nearest_refseq=NM_009464 | ||
|nearest_unigene=Mm.6254 | |nearest_unigene=Mm.6254 | ||
| − | |num_trans= | + | |num_trans=100038497 |
|species=mouse | |species=mouse | ||
|start=100467253 | |start=100467253 | ||
|start_of_center_position=100467259 | |start_of_center_position=100467259 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-34(GACTTTAAAGGG,-,0.00),-33(ACTTTAAAGGGG,+,0.00) |
|transcript_name=ENSMUST00000184420.1 AK143876 | |transcript_name=ENSMUST00000184420.1 AK143876 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 07:58, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 100467259 |
|---|---|
| End of the center position in the TSS region: | 100467260 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000184420.1 AK143876 |
|---|---|
| Distance: | 64 |
| Num_trans: | 100038497 |
| All_trans: | MGI:3642592 |
TATA-Box annotation
| Distance to TSS: | -5731 |
|---|---|
| Nearest PromoterID: | NM_009464 |
| Entrez ID: | 22229 |
| Nearest Unigene: | Mm.6254 |
| Nearest Refseq: | NM_009464 |
| Nearest Ensembl: | ENSMUSG00000032942 |
| Gene Name: | predicted gene 10603 |
| Gene Alias: | AI645527|Slc25a9|UCP-3 |
| Gene Description: | uncoupling protein 3 (mitochondrial, proton carrier) |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GACTTTAAAGGG,-,0.00),-33(ACTTTAAAGGGG,+,0.00) |
