Personal tools

Difference between revisions of "TSS:Hg 124699.1"

From referenceTSS

Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=JF432877:0 AF397212:0 KJ904820:0 ENST00000535610.5:-1 uc058lwc.1:-1 AF271388:-2 AK222981:-13 AK022927:-24 AL832975:-62 ENST00000534981.5:-63 uc058lwb.1:-63 BC016609:-63 ENST00000229329.6:-114 NR_135117:-114 NM_018686:-114 uc001rfm.5:-114
+
|all_trans=HGNC:18290
 
|chr=chr12
 
|chr=chr12
 
|cpg_percent=0.12
 
|cpg_percent=0.12
 
|distance=0
 
|distance=0
|distance_to_tss=122
+
|distance_to_tss=78
 
|end=22046305
 
|end=22046305
 
|end_of_center_position=22046297
 
|end_of_center_position=22046297
Line 22: Line 22:
 
|nearest_refseq=NM_018686
 
|nearest_refseq=NM_018686
 
|nearest_unigene=Hs.311346
 
|nearest_unigene=Hs.311346
|num_trans=16
+
|num_trans=55907
 
|species=human
 
|species=human
 
|start=22046287
 
|start=22046287
 
|start_of_center_position=22046296
 
|start_of_center_position=22046296
 
|strand=+
 
|strand=+
|transcript_name=JF432877 AF397212 KJ904820
+
|transcript_name=JF432877 AF397212
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_124699.1
 
|tss_id=hg_124699.1

Latest revision as of 02:31, 20 July 2021

Basic information about the TSS


TSS ID:hg_124699.1
Species:human
Chr:chr12
TSS Classification:yes
Start:22046287
End:22046305
Strand:+
TSS Score:1
Start of the center position in the TSS region:22046296
End of the center position in the TSS region:22046297



Gene and protein annotation


Transcript_name:JF432877 AF397212
Distance:0
GeneID:55907
HGNC/MGI_ID:HGNC:18290
UniProt_ID:
Gene_name:cytidine monophosphate N-acetylneuraminic acid synthetase
Gene_symbol:CMAS
Gene_synonyms:
Gene_source:HGNC:18290



Transcript annotation


Transcript_name:JF432877 AF397212
Distance:0
Num_trans:55907
All_trans:HGNC:18290



TATA-Box annotation


Distance to TSS:78
Nearest PromoterID:NM_018686
Entrez ID:55907
Nearest Unigene:Hs.311346
Nearest Refseq:NM_018686
Nearest Ensembl:ENSG00000111726
Gene Name:cytidine monophosphate N-acetylneuraminic acid synthetase
Gene Alias:CSS
Gene Description:cytidine monophosphate N-acetylneuraminic acid synthetase
Gene Type:protein-coding
CpG%:0.12
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):