Difference between revisions of "TSS:Hg 107800.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |GTPBP7= | ||
| + | |all_trans=LF384310:3 MA619887:3 ENST00000477902.6:-5 BC026039:27 ENST00000317502.11:43 NM_138384:43 AK308997:54 BC004409:57 ENST00000432508.3:60 ENST00000460848.5:82 AK074976:82 AK293988:95 BC035721:99 ENST00000495014.5:100 EU831508:105 EU831415:105 ENST00000498790.5:110 BC026725:124 ENST00000473735.1:159 AK292515:161 AK125012:241 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance_to_tss=- | + | |distance=3 |
| + | |distance_to_tss=-51 | ||
| + | |end=133394114 | ||
| + | |end_of_center_position=133394107 | ||
|entrez_id=92170 | |entrez_id=92170 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=GTP | + | |gene_alias=GTP{{!}}GTPBP7 |
|gene_description=mitochondrial ribosome associated GTPase 1 | |gene_description=mitochondrial ribosome associated GTPase 1 | ||
| + | |gene_id=92170 | ||
|gene_name=MTG1 | |gene_name=MTG1 | ||
| + | |gene_source=HGNC:32159 | ||
| + | |gene_symbol=MTG1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:32159 | ||
|nearest_ensembl=ENSG00000148824 | |nearest_ensembl=ENSG00000148824 | ||
|nearest_promoter_id=NM_138384 | |nearest_promoter_id=NM_138384 | ||
|nearest_refseq=NM_138384 | |nearest_refseq=NM_138384 | ||
|nearest_unigene=Hs.501578 | |nearest_unigene=Hs.501578 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=133394098 | ||
| + | |start_of_center_position=133394106 | ||
| + | |strand=+ | ||
| + | |transcript_name=LF384310 MA619887 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_107800.1 | |tss_id=hg_107800.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9BT17 | ||
}} | }} | ||
Latest revision as of 19:09, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133394106 |
|---|---|
| End of the center position in the TSS region: | 133394107 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF384310 MA619887 |
|---|---|
| Distance: | 3 |
| Num_trans: | 21 |
| All_trans: | LF384310:3 MA619887:3 ENST00000477902.6:-5 BC026039:27 ENST00000317502.11:43 NM_138384:43 AK308997:54 BC004409:57 ENST00000432508.3:60 ENST00000460848.5:82 AK074976:82 AK293988:95 BC035721:99 ENST00000495014.5:100 EU831508:105 EU831415:105 ENST00000498790.5:110 BC026725:124 ENST00000473735.1:159 AK292515:161 AK125012:241 |
TATA-Box annotation
| Distance to TSS: | -51 |
|---|---|
| Nearest PromoterID: | NM_138384 |
| Entrez ID: | 92170 |
| Nearest Unigene: | Hs.501578 |
| Nearest Refseq: | NM_138384 |
| Nearest Ensembl: | ENSG00000148824 |
| Gene Name: | MTG1 |
| Gene Alias: | GTP|GTPBP7 |
| Gene Description: | mitochondrial ribosome associated GTPase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
