Difference between revisions of "TSS:Hg 158414.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000602766.1:2 uc059xzu.1:2 ENST00000602719.5:-7 uc059xzp.1:-7 ENST00000602914.1:9 uc059xzt.1:9 AB115765:11 ENST00000284245.8:23 uc002fjc.5:23 NM_2...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23362 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-22 |
|end=85751122 | |end=85751122 | ||
| + | |end_of_center_position=85751118 | ||
|entrez_id=404550 | |entrez_id=404550 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:23362 | |hgnc_mgi_id=HGNC:23362 | ||
|nearest_ensembl=ENSG00000154102 | |nearest_ensembl=ENSG00000154102 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_161452 |
|nearest_refseq=NM_206967 | |nearest_refseq=NM_206967 | ||
|nearest_unigene=Hs.461655 | |nearest_unigene=Hs.461655 | ||
| − | |num_trans= | + | |num_trans=404550 |
|species=human | |species=human | ||
|start=85751113 | |start=85751113 | ||
| + | |start_of_center_position=85751117 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000602766 | + | |transcript_name=ENST00000602766.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_158414.1 | |tss_id=hg_158414.1 | ||
Latest revision as of 14:44, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 85751117 |
|---|---|
| End of the center position in the TSS region: | 85751118 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000602766.1 |
|---|---|
| Distance: | 2 |
| Num_trans: | 404550 |
| All_trans: | HGNC:23362 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NR_161452 |
| Entrez ID: | 404550 |
| Nearest Unigene: | Hs.461655 |
| Nearest Refseq: | NM_206967 |
| Nearest Ensembl: | ENSG00000154102 |
| Gene Name: | chromosome 16 open reading frame 74 |
| Gene Alias: | - |
| Gene Description: | chromosome 16 open reading frame 74 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
