Difference between revisions of "TSS:Hg 159727.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC063588:0 BC014102:0 AL834513:-1 BC016384:278 |chr=chr17 |cpg_percent=0.02 |distance=0 |distance_to_tss=32975 |end=17075760 |entrez_id=23164 |gc_percen...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MRIP= |
| + | |RHOIP3= | ||
| + | |RIP3= | ||
| + | |all_trans=HGNC:30321 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=32975 | |distance_to_tss=32975 | ||
|end=17075760 | |end=17075760 | ||
| + | |end_of_center_position=17075736 | ||
|entrez_id=23164 | |entrez_id=23164 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| − | |gene_alias=M-RIP | + | |gene_alias=M-RIP{{!}}MRIP{{!}}RHOIP3{{!}}RIP3{{!}}p116Rip |
|gene_description=myosin phosphatase Rho interacting protein | |gene_description=myosin phosphatase Rho interacting protein | ||
|gene_id=23164 | |gene_id=23164 | ||
| Line 18: | Line 22: | ||
|hgnc_mgi_id=HGNC:30321 | |hgnc_mgi_id=HGNC:30321 | ||
|nearest_ensembl=ENSG00000133030 | |nearest_ensembl=ENSG00000133030 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_201274 |
|nearest_refseq=NM_015134 | |nearest_refseq=NM_015134 | ||
|nearest_unigene=Hs.462341 | |nearest_unigene=Hs.462341 | ||
| − | |num_trans= | + | |num_trans=23164 |
| + | |p116Rip= | ||
|species=human | |species=human | ||
|start=17075710 | |start=17075710 | ||
| + | |start_of_center_position=17075735 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-18(CCATTTATGGCG,+,0.00) |
|transcript_name=BC063588 BC014102 | |transcript_name=BC063588 BC014102 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 15:14, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17075735 |
|---|---|
| End of the center position in the TSS region: | 17075736 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC063588 BC014102 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23164 |
| All_trans: | HGNC:30321 |
TATA-Box annotation
| Distance to TSS: | 32975 |
|---|---|
| Nearest PromoterID: | NM_201274 |
| Entrez ID: | 23164 |
| Nearest Unigene: | Hs.462341 |
| Nearest Refseq: | NM_015134 |
| Nearest Ensembl: | ENSG00000133030 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | M-RIP|MRIP|RHOIP3|RIP3|p116Rip |
| Gene Description: | myosin phosphatase Rho interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -18(CCATTTATGGCG,+,0.00) |
