Difference between revisions of "TSS:Hg 134743.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LYST2= | |LYST2= | ||
| − | |all_trans= | + | |all_trans=HGNC:7648 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 10: | Line 10: | ||
|entrez_id=26960 | |entrez_id=26960 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=BCL8B | + | |gene_alias=BCL8B{{!}}LYST2 |
|gene_description=neurobeachin | |gene_description=neurobeachin | ||
|gene_id=26960 | |gene_id=26960 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015678 | |nearest_refseq=NM_015678 | ||
|nearest_unigene=Hs.491172 | |nearest_unigene=Hs.491172 | ||
| − | |num_trans= | + | |num_trans=26960 |
|species=human | |species=human | ||
|start=34942253 | |start=34942253 | ||
|start_of_center_position=34942306 | |start_of_center_position=34942306 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000400445.7 | + | |transcript_name=ENST00000379939.7 ENST00000400445.7 AF467288 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_134743.1 | |tss_id=hg_134743.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5T321 Q8NFP9 |
}} | }} | ||
Latest revision as of 06:08, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34942306 |
|---|---|
| End of the center position in the TSS region: | 34942307 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000379939.7 ENST00000400445.7 AF467288 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26960 |
| All_trans: | HGNC:7648 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_015678 |
| Entrez ID: | 26960 |
| Nearest Unigene: | Hs.491172 |
| Nearest Refseq: | NM_015678 |
| Nearest Ensembl: | ENSG00000172915 |
| Gene Name: | neurobeachin |
| Gene Alias: | BCL8B|LYST2 |
| Gene Description: | neurobeachin |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
