Difference between revisions of "TSS:Mm 130089.1"
From referenceTSS
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1917363 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-28 | |distance_to_tss=-28 | ||
|end=89379300 | |end=89379300 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001013022 | |nearest_refseq=NM_001013022 | ||
|nearest_unigene=Mm.247273 | |nearest_unigene=Mm.247273 | ||
| − | |num_trans= | + | |num_trans=70113 |
|species=mouse | |species=mouse | ||
|start=89379264 | |start=89379264 | ||
|start_of_center_position=89379282 | |start_of_center_position=89379282 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENSMUST00000228111.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_130089.1 | |tss_id=mm_130089.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2I3BQ23 |
}} | }} | ||
Latest revision as of 21:29, 26 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89379282 |
|---|---|
| End of the center position in the TSS region: | 89379283 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000228111.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 70113 |
| All_trans: | MGI:1917363 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_001013022 |
| Entrez ID: | 70113 |
| Nearest Unigene: | Mm.247273 |
| Nearest Refseq: | NM_001013022 |
| Nearest Ensembl: | ENSMUSG00000047394 |
| Gene Name: | outer dense fiber of sperm tails 3B |
| Gene Alias: | 2010001J22Rik |
| Gene Description: | outer dense fiber of sperm tails 3B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
