Difference between revisions of "TSS:Hg 108310.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.17 |distance_to_tss=-26031 |entrez_id=222389 |gc_percent=0.870647 |gene_alias=C10orf30 |gene_description=BEN domain containing 7 |gene_name=BEND7 |g...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:23514 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| − | |distance_to_tss= | + | |distance=0 |
| + | |distance_to_tss=7 | ||
| + | |end=13529042 | ||
| + | |end_of_center_position=13529007 | ||
|entrez_id=222389 | |entrez_id=222389 | ||
|gc_percent=0.870647 | |gc_percent=0.870647 | ||
|gene_alias=C10orf30 | |gene_alias=C10orf30 | ||
|gene_description=BEN domain containing 7 | |gene_description=BEN domain containing 7 | ||
| − | |gene_name=BEND7 | + | |gene_id=222389 |
| + | |gene_name=BEN domain containing 7 | ||
| + | |gene_source=HGNC:23514 | ||
| + | |gene_symbol=BEND7 | ||
| + | |gene_synonyms=FLJ40283 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:23514 | ||
|nearest_ensembl=ENSG00000165626 | |nearest_ensembl=ENSG00000165626 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369863 |
|nearest_refseq=NM_152751 | |nearest_refseq=NM_152751 | ||
|nearest_unigene=Hs.498740 | |nearest_unigene=Hs.498740 | ||
| + | |num_trans=222389 | ||
| + | |species=human | ||
| + | |start=13528971 | ||
| + | |start_of_center_position=13529006 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000466271.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_108310.1 | |tss_id=hg_108310.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 20:33, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13529006 |
|---|---|
| End of the center position in the TSS region: | 13529007 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000466271.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 222389 |
| All_trans: | HGNC:23514 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001369863 |
| Entrez ID: | 222389 |
| Nearest Unigene: | Hs.498740 |
| Nearest Refseq: | NM_152751 |
| Nearest Ensembl: | ENSG00000165626 |
| Gene Name: | BEN domain containing 7 |
| Gene Alias: | C10orf30 |
| Gene Description: | BEN domain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.870647 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
