Difference between revisions of "TSS:Hg 16306.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AF161553:0 AJ012449:0 AF205218:-3 BC067739:6 DQ443528:17 ENST00000459929.5:-22 uc057nxv.1:-22 AK023123:-22 ENST00000367498.7:-78 NM_006469:-78 uc001grl....") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | | | + | |HSPC068= |
| + | |KLHL39= | ||
| + | |ND1= | ||
| + | |NS-1= | ||
| + | |NS1-BP= | ||
| + | |NS1BP= | ||
| + | |all_trans=HGNC:16951 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=185317251 | |end=185317251 | ||
| + | |end_of_center_position=185317243 | ||
|entrez_id=10625 | |entrez_id=10625 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=FLARA3 | + | |gene_alias=ARA3{{!}}FLARA3{{!}}HSPC068{{!}}KLHL39{{!}}ND1{{!}}NS-1{{!}}NS1-BP{{!}}NS1BP |
|gene_description=influenza virus NS1A binding protein | |gene_description=influenza virus NS1A binding protein | ||
|gene_id=10625 | |gene_id=10625 | ||
| Line 14: | Line 21: | ||
|gene_source=HGNC:16951 | |gene_source=HGNC:16951 | ||
|gene_symbol=IVNS1ABP | |gene_symbol=IVNS1ABP | ||
| − | |gene_synonyms=HSPC068 KIAA0850 KLHL39 ND1 NS-1 NS1-BP | + | |gene_synonyms=ARA3 HSPC068 KIAA0850 KLHL39 ND1 NS-1 NS1-BP |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16951 | |hgnc_mgi_id=HGNC:16951 | ||
| Line 21: | Line 28: | ||
|nearest_refseq=NM_006469 | |nearest_refseq=NM_006469 | ||
|nearest_unigene=Hs.497183 | |nearest_unigene=Hs.497183 | ||
| − | |num_trans= | + | |num_trans=10625 |
|species=human | |species=human | ||
|start=185317234 | |start=185317234 | ||
| + | |start_of_center_position=185317242 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AF161553 AJ012449 | + | |transcript_name=ENST00000367498.8 AF161553 AJ012449 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_16306.1 | |tss_id=hg_16306.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9Y6Y0 |
}} | }} | ||
Latest revision as of 16:26, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 185317242 |
|---|---|
| End of the center position in the TSS region: | 185317243 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000367498.8 AF161553 AJ012449 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10625 |
| All_trans: | HGNC:16951 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_006469 |
| Entrez ID: | 10625 |
| Nearest Unigene: | Hs.497183 |
| Nearest Refseq: | NM_006469 |
| Nearest Ensembl: | ENSG00000116679 |
| Gene Name: | influenza virus NS1A binding protein |
| Gene Alias: | ARA3|FLARA3|HSPC068|KLHL39|ND1|NS-1|NS1-BP|NS1BP |
| Gene Description: | influenza virus NS1A binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
