Difference between revisions of "TSS:Hg 235019.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:1107 HGNC:11551 |
| − | |chr= | + | |chr=chr14 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-2 |
|distance_to_tss=35901 | |distance_to_tss=35901 | ||
| − | |end= | + | |end=105315488 |
|end_of_center_position=105315488 | |end_of_center_position=105315488 | ||
|entrez_id=100874096 | |entrez_id=100874096 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=DOCK9 antisense RNA 1 | |gene_description=DOCK9 antisense RNA 1 | ||
| − | |gene_id= | + | |gene_id=2972 |
| − | |gene_name= | + | |gene_name=BRF1 RNA polymerase III transcription initiation factor subunit; ZFP36 ring finger protein like 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:1107 HGNC:11551 |
| − | |gene_symbol= | + | |gene_symbol=BRF1 ZFP36L1 |
| − | |gene_synonyms= | + | |gene_synonyms=BRF Berg36 ERF1 RNF162B TFIIIB90 TIS11B cMG1 hBRF |
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:1107 HGNC:11551 |
|nearest_ensembl=ENSG00000229918 | |nearest_ensembl=ENSG00000229918 | ||
|nearest_promoter_id=NR_046663 | |nearest_promoter_id=NR_046663 | ||
|nearest_refseq=NR_046663 | |nearest_refseq=NR_046663 | ||
|nearest_unigene=Hs.578066 | |nearest_unigene=Hs.578066 | ||
| − | |num_trans= | + | |num_trans=2972 |
|species=human | |species=human | ||
| − | |start= | + | |start=105315487 |
|start_of_center_position=105315487 | |start_of_center_position=105315487 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000327359.7 AK295579 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_235019.1 | |tss_id=hg_235019.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q92994 |
}} | }} | ||
Latest revision as of 12:06, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 105315487 |
|---|---|
| End of the center position in the TSS region: | 105315488 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000327359.7 AK295579 |
|---|---|
| Distance: | -2 |
| Num_trans: | 2972 |
| All_trans: | HGNC:1107 HGNC:11551 |
TATA-Box annotation
| Distance to TSS: | 35901 |
|---|---|
| Nearest PromoterID: | NR_046663 |
| Entrez ID: | 100874096 |
| Nearest Unigene: | Hs.578066 |
| Nearest Refseq: | NR_046663 |
| Nearest Ensembl: | ENSG00000229918 |
| Gene Name: | BRF1 RNA polymerase III transcription initiation factor subunit; ZFP36 ring finger protein like 1 |
| Gene Alias: | - |
| Gene Description: | DOCK9 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
