Difference between revisions of "TSS:Hg 235020.1"
From referenceTSS
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|ZIZIMIN1= | |ZIZIMIN1= | ||
|all_trans=ENST00000448493.6:25 ENST00000339416.6:25 NM_015296:25 NM_001318849:25 NM_001130049:25 uc058xyl.1:25 uc010tir.2:25 AF527605:25 BC146814:31 ENST00000479769.1:38 uc058xyv.1:38 BC171753:45 BC136274:45 ENST00000427887.2:-194 uc010tit.2:-194 | |all_trans=ENST00000448493.6:25 ENST00000339416.6:25 NM_015296:25 NM_001318849:25 NM_001130049:25 uc058xyl.1:25 uc010tir.2:25 AF527605:25 BC146814:31 ENST00000479769.1:38 uc058xyv.1:38 BC171753:45 BC136274:45 ENST00000427887.2:-194 uc010tit.2:-194 | ||
| − | |chr= | + | |chr=chr14 |
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=263 |
| − | |end= | + | |end=105418160 |
|end_of_center_position=105418160 | |end_of_center_position=105418160 | ||
|entrez_id=23348 | |entrez_id=23348 | ||
|gc_percent=0.860697 | |gc_percent=0.860697 | ||
| − | |gene_alias=ZIZ1 | + | |gene_alias=ZIZ1{{!}}ZIZIMIN1 |
|gene_description=dedicator of cytokinesis 9 | |gene_description=dedicator of cytokinesis 9 | ||
|gene_id=23348 | |gene_id=23348 | ||
| − | |gene_name= | + | |gene_name=DOCK9 |
|gene_source=HGNC:14132 | |gene_source=HGNC:14132 | ||
|gene_symbol=DOCK9 | |gene_symbol=DOCK9 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015296 | |nearest_refseq=NM_015296 | ||
|nearest_unigene=Hs.596105 | |nearest_unigene=Hs.596105 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
| − | |start= | + | |start=105418158 |
|start_of_center_position=105418159 | |start_of_center_position=105418159 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name= |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_235020.1 | |tss_id=hg_235020.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A088AWN3 A0A0A0MRA7 Q9BZ29 | |uniprot_id=A0A088AWN3 A0A0A0MRA7 Q9BZ29 | ||
}} | }} | ||
Latest revision as of 09:36, 14 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 105418159 |
|---|---|
| End of the center position in the TSS region: | 105418160 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000448493.6:25 ENST00000339416.6:25 NM_015296:25 NM_001318849:25 NM_001130049:25 uc058xyl.1:25 uc010tir.2:25 AF527605:25 BC146814:31 ENST00000479769.1:38 uc058xyv.1:38 BC171753:45 BC136274:45 ENST00000427887.2:-194 uc010tit.2:-194 |
TATA-Box annotation
| Distance to TSS: | 263 |
|---|---|
| Nearest PromoterID: | NM_015296 |
| Entrez ID: | 23348 |
| Nearest Unigene: | Hs.596105 |
| Nearest Refseq: | NM_015296 |
| Nearest Ensembl: | ENSG00000088387 |
| Gene Name: | DOCK9 |
| Gene Alias: | ZIZ1|ZIZIMIN1 |
| Gene Description: | dedicator of cytokinesis 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.860697 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
