Difference between revisions of "TSS:Hg 57647.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:18757 |
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=-29 | |distance=-29 | ||
| − | |distance_to_tss= | + | |distance_to_tss=208 |
|end=95731901 | |end=95731901 | ||
|end_of_center_position=95731895 | |end_of_center_position=95731895 | ||
| − | |entrez_id= | + | |entrez_id=83890 |
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=- | + | |gene_alias=NYD-SP16 |
| − | |gene_description= | + | |gene_description=spermatogenesis associated 9 |
|gene_id=22836 | |gene_id=22836 | ||
|gene_name=Rho related BTB domain containing 3 | |gene_name=Rho related BTB domain containing 3 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:18757 | |hgnc_mgi_id=HGNC:18757 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000145757 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001349303 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_031952 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.50499 |
| − | |num_trans= | + | |num_trans=22836 |
|species=human | |species=human | ||
|start=95731887 | |start=95731887 | ||
Latest revision as of 03:24, 22 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95731894 |
|---|---|
| End of the center position in the TSS region: | 95731895 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB385392 |
|---|---|
| Distance: | -29 |
| Num_trans: | 22836 |
| All_trans: | HGNC:18757 |
TATA-Box annotation
| Distance to TSS: | 208 |
|---|---|
| Nearest PromoterID: | NM_001349303 |
| Entrez ID: | 83890 |
| Nearest Unigene: | Hs.50499 |
| Nearest Refseq: | NM_031952 |
| Nearest Ensembl: | ENSG00000145757 |
| Gene Name: | Rho related BTB domain containing 3 |
| Gene Alias: | NYD-SP16 |
| Gene Description: | spermatogenesis associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
