Difference between revisions of "TSS:Hg 166010.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=EF608069:0 X05803:10 ENST00000590038.1:-250 uc060fch.1:-250 |chr=chr17 |cpg_percent=0.02 |distance=0 |distance_to_tss=1633 |end=41623018 |entrez_id=3872...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |CK-17= |
| + | |K17= | ||
| + | |PC= | ||
| + | |PC2= | ||
| + | |PCHC1= | ||
| + | |all_trans=HGNC:6427 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1578 |
|end=41623018 | |end=41623018 | ||
| + | |end_of_center_position=41622997 | ||
|entrez_id=3872 | |entrez_id=3872 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=39.1 | + | |gene_alias=39.1{{!}}CK-17{{!}}K17{{!}}PC{{!}}PC2{{!}}PCHC1 |
|gene_description=keratin 17 | |gene_description=keratin 17 | ||
|gene_id=3872 | |gene_id=3872 | ||
| Line 21: | Line 27: | ||
|nearest_refseq=NM_000422 | |nearest_refseq=NM_000422 | ||
|nearest_unigene=Hs.2785 | |nearest_unigene=Hs.2785 | ||
| − | |num_trans= | + | |num_trans=3872 |
|species=human | |species=human | ||
|start=41622975 | |start=41622975 | ||
| + | |start_of_center_position=41622996 | ||
|strand=- | |strand=- | ||
|transcript_name=EF608069 | |transcript_name=EF608069 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_166010.1 | |tss_id=hg_166010.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:31, 20 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 41622996 |
|---|---|
| End of the center position in the TSS region: | 41622997 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | EF608069 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3872 |
| All_trans: | HGNC:6427 |
TATA-Box annotation
| Distance to TSS: | 1578 |
|---|---|
| Nearest PromoterID: | NM_000422 |
| Entrez ID: | 3872 |
| Nearest Unigene: | Hs.2785 |
| Nearest Refseq: | NM_000422 |
| Nearest Ensembl: | ENSG00000128422 |
| Gene Name: | keratin 17 |
| Gene Alias: | 39.1|CK-17|K17|PC|PC2|PCHC1 |
| Gene Description: | keratin 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
