Difference between revisions of "TSS:Hg 151904.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|NM23H4= | |NM23H4= | ||
| − | |all_trans=Y07604:0 AB528678:0 | + | |all_trans=Y07604:0 AB528678:0 KJ905838:0 JF432627:0 KJ905242:0 BT019438:0 ENST00000382940.8:-1 BC004880:-1 ENST00000460297.1:-2 ENST00000444498.5:-10 ENST00000448828.5:-11 ENST00000219479.7:-11 NM_001286438:-11 NM_005009:-11 NM_001286435:-11 ENST00000433358.5:12 ENST00000620944.4:-18 ENST00000621774.4:-18 NM_001286439:-18 NM_001286433:-18 BC017067:-18 LP895315:-30 ENST00000454619.5:-441 NM_001286436:-481 ENST00000397722.5:-485 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=397225 | |end=397225 | ||
|end_of_center_position=397218 | |end_of_center_position=397218 | ||
|entrez_id=4833 | |entrez_id=4833 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=NDPK-D | + | |gene_alias=NDPK-D{{!}}NM23H4{{!}}nm23-H4 |
|gene_description=NME/NM23 nucleoside diphosphate kinase 4 | |gene_description=NME/NM23 nucleoside diphosphate kinase 4 | ||
|gene_id=4833 | |gene_id=4833 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:7852 | |hgnc_mgi_id=HGNC:7852 | ||
|nearest_ensembl=ENSG00000103202 | |nearest_ensembl=ENSG00000103202 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286435 |
|nearest_refseq=NM_005009 | |nearest_refseq=NM_005009 | ||
|nearest_unigene=Hs.9235 | |nearest_unigene=Hs.9235 | ||
|nm23-H4= | |nm23-H4= | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=397209 | |start=397209 | ||
|start_of_center_position=397217 | |start_of_center_position=397217 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=Y07604 AB528678 JF432627 | + | |transcript_name=Y07604 AB528678 KJ905838 JF432627 KJ905242 BT019438 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_151904.1 | |tss_id=hg_151904.1 | ||
Revision as of 12:13, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 397217 |
|---|---|
| End of the center position in the TSS region: | 397218 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | Y07604 AB528678 KJ905838 JF432627 KJ905242 BT019438 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | Y07604:0 AB528678:0 KJ905838:0 JF432627:0 KJ905242:0 BT019438:0 ENST00000382940.8:-1 BC004880:-1 ENST00000460297.1:-2 ENST00000444498.5:-10 ENST00000448828.5:-11 ENST00000219479.7:-11 NM_001286438:-11 NM_005009:-11 NM_001286435:-11 ENST00000433358.5:12 ENST00000620944.4:-18 ENST00000621774.4:-18 NM_001286439:-18 NM_001286433:-18 BC017067:-18 LP895315:-30 ENST00000454619.5:-441 NM_001286436:-481 ENST00000397722.5:-485 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_001286435 |
| Entrez ID: | 4833 |
| Nearest Unigene: | Hs.9235 |
| Nearest Refseq: | NM_005009 |
| Nearest Ensembl: | ENSG00000103202 |
| Gene Name: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Alias: | NDPK-D|NM23H4|nm23-H4 |
| Gene Description: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
