Difference between revisions of "TSS:Hg 151906.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NM23H4= | |NM23H4= | ||
| − | |all_trans=ENST00000433358.5 | + | |all_trans=ENST00000433358.5:-19 BT019438:-33 AB528678:-34 KJ905838:-34 JF432627:-34 KJ905242:-34 Y07604:-44 ENST00000382940.8:-47 BC004880:-47 ENST00000460297.1:-48 ENST00000444498.5:-56 ENST00000448828.5:-57 ENST00000219479.7:-57 NM_001286438:-57 NM_005009:-57 NM_001286435:-57 ENST00000620944.4:-64 ENST00000621774.4:-64 NM_001286439:-64 NM_001286433:-64 BC017067:-64 LP895315:-76 ENST00000450036.1:476 NM_001286440:476 ENST00000454619.5:-487 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=-19 | |distance=-19 | ||
| − | |distance_to_tss= | + | |distance_to_tss=62 |
|end=397266 | |end=397266 | ||
|end_of_center_position=397261 | |end_of_center_position=397261 | ||
|entrez_id=4833 | |entrez_id=4833 | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
| − | |gene_alias=NDPK-D | + | |gene_alias=NDPK-D{{!}}NM23H4{{!}}nm23-H4 |
|gene_description=NME/NM23 nucleoside diphosphate kinase 4 | |gene_description=NME/NM23 nucleoside diphosphate kinase 4 | ||
|gene_id=4833 | |gene_id=4833 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:7852 | |hgnc_mgi_id=HGNC:7852 | ||
|nearest_ensembl=ENSG00000103202 | |nearest_ensembl=ENSG00000103202 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286435 |
|nearest_refseq=NM_005009 | |nearest_refseq=NM_005009 | ||
|nearest_unigene=Hs.9235 | |nearest_unigene=Hs.9235 | ||
|nm23-H4= | |nm23-H4= | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=397255 | |start=397255 | ||
|start_of_center_position=397260 | |start_of_center_position=397260 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000433358.5 | + | |transcript_name=ENST00000433358.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_151906.1 | |tss_id=hg_151906.1 | ||
Revision as of 12:13, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 397260 |
|---|---|
| End of the center position in the TSS region: | 397261 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000433358.5 |
|---|---|
| Distance: | -19 |
| Num_trans: | 25 |
| All_trans: | ENST00000433358.5:-19 BT019438:-33 AB528678:-34 KJ905838:-34 JF432627:-34 KJ905242:-34 Y07604:-44 ENST00000382940.8:-47 BC004880:-47 ENST00000460297.1:-48 ENST00000444498.5:-56 ENST00000448828.5:-57 ENST00000219479.7:-57 NM_001286438:-57 NM_005009:-57 NM_001286435:-57 ENST00000620944.4:-64 ENST00000621774.4:-64 NM_001286439:-64 NM_001286433:-64 BC017067:-64 LP895315:-76 ENST00000450036.1:476 NM_001286440:476 ENST00000454619.5:-487 |
TATA-Box annotation
| Distance to TSS: | 62 |
|---|---|
| Nearest PromoterID: | NM_001286435 |
| Entrez ID: | 4833 |
| Nearest Unigene: | Hs.9235 |
| Nearest Refseq: | NM_005009 |
| Nearest Ensembl: | ENSG00000103202 |
| Gene Name: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Alias: | NDPK-D|NM23H4|nm23-H4 |
| Gene Description: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
