Difference between revisions of "TSS:Hg 236085.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000433358.5:-51 BT019438:-65 AB528678:-66 KJ905838:-66 JF432627:-66 KJ905242:-66 Y07604:-76 ENST00000382940.8:-79 BC004880:-79 ENST00000460297.1:-80 ENST00000444498.5:-88 ENST00000448828.5:-89 ENST00000219479.7:-89 NM_001286438:-89 NM_005009:-89 NM_001286435:-89 ENST00000620944.4:-96 ENST00000621774.4:-96 NM_001286439:-96 NM_001286433:-96 BC017067:-96 LP895315:-108 ENST00000450036.1:446 NM_001286440:446 BC011968:477 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=-51 |
|distance_to_tss=25201 | |distance_to_tss=25201 | ||
|end=2937180 | |end=2937180 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=FLYWCH-type zinc finger 1 | |gene_description=FLYWCH-type zinc finger 1 | ||
| − | |gene_name= | + | |gene_id=4833 |
| + | |gene_name=NME/NM23 nucleoside diphosphate kinase 4 | ||
| + | |gene_source=HGNC:7852 | ||
| + | |gene_symbol=NME4 | ||
| + | |gene_synonyms=NDPKD NM23H4 nm23-H4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7852 | ||
|nearest_ensembl=ENSG00000059122 | |nearest_ensembl=ENSG00000059122 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020912 |
|nearest_refseq=NM_020912 | |nearest_refseq=NM_020912 | ||
|nearest_unigene=Hs.655321 | |nearest_unigene=Hs.655321 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=2937179 | |start=2937179 | ||
|start_of_center_position=397291 | |start_of_center_position=397291 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000433358.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_236085.1 | |tss_id=hg_236085.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=H0Y6J0 | ||
}} | }} | ||
Revision as of 13:48, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 397291 |
|---|---|
| End of the center position in the TSS region: | 397292 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000433358.5 |
|---|---|
| Distance: | -51 |
| Num_trans: | 25 |
| All_trans: | ENST00000433358.5:-51 BT019438:-65 AB528678:-66 KJ905838:-66 JF432627:-66 KJ905242:-66 Y07604:-76 ENST00000382940.8:-79 BC004880:-79 ENST00000460297.1:-80 ENST00000444498.5:-88 ENST00000448828.5:-89 ENST00000219479.7:-89 NM_001286438:-89 NM_005009:-89 NM_001286435:-89 ENST00000620944.4:-96 ENST00000621774.4:-96 NM_001286439:-96 NM_001286433:-96 BC017067:-96 LP895315:-108 ENST00000450036.1:446 NM_001286440:446 BC011968:477 |
TATA-Box annotation
| Distance to TSS: | 25201 |
|---|---|
| Nearest PromoterID: | NM_020912 |
| Entrez ID: | 84256 |
| Nearest Unigene: | Hs.655321 |
| Nearest Refseq: | NM_020912 |
| Nearest Ensembl: | ENSG00000059122 |
| Gene Name: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Alias: | - |
| Gene Description: | FLYWCH-type zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
