Difference between revisions of "TSS:Mm 148758.1"
From referenceTSS
| Line 3: | Line 3: | ||
|ORF6= | |ORF6= | ||
|Znhit2-ps= | |Znhit2-ps= | ||
| − | |all_trans=BC019440:-17 AK164029:-24 NM_013859 | + | |all_trans=BC019440:-17 AK164029:-24 NM_013859:-31 AK086863:-31 AF119498:-41 ENSMUST00000162726.4:-46 BC092256:-46 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 12: | Line 12: | ||
|entrez_id=29805 | |entrez_id=29805 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=C11orf5 | + | |gene_alias=C11orf5{{!}}Fon{{!}}ORF6{{!}}Znhit2-ps |
| − | |gene_description= | + | |gene_description=zinc finger, HIT domain containing 2 |
|gene_id=29805 | |gene_id=29805 | ||
| − | |gene_name= | + | |gene_name=zinc finger, HIT domain containing 2 |
|gene_source=MGI:1352481 | |gene_source=MGI:1352481 | ||
|gene_symbol=Znhit2 | |gene_symbol=Znhit2 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_013859 | |nearest_refseq=NM_013859 | ||
|nearest_unigene=Mm.2310 | |nearest_unigene=Mm.2310 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=6061237 | |start=6061237 | ||
Revision as of 11:07, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6061244 |
|---|---|
| End of the center position in the TSS region: | 6061245 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC019440 |
|---|---|
| Distance: | -17 |
| Num_trans: | 7 |
| All_trans: | BC019440:-17 AK164029:-24 NM_013859:-31 AK086863:-31 AF119498:-41 ENSMUST00000162726.4:-46 BC092256:-46 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_013859 |
| Entrez ID: | 29805 |
| Nearest Unigene: | Mm.2310 |
| Nearest Refseq: | NM_013859 |
| Nearest Ensembl: | ENSMUSG00000075227 |
| Gene Name: | zinc finger, HIT domain containing 2 |
| Gene Alias: | C11orf5|Fon|ORF6|Znhit2-ps |
| Gene Description: | zinc finger, HIT domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
