Difference between revisions of "TSS:Hg 158414.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000602766 | + | |all_trans=ENST00000602766.1:2 ENST00000602719.5:-7 ENST00000602914.1:9 AB115765:11 ENST00000284245.9:18 NM_206967:18 NR_161454:18 NR_161453:18 NR_161452:18 AB115764:45 ENST00000602758.1:104 ENST00000602675.5:163 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-22 |
|end=85751122 | |end=85751122 | ||
|end_of_center_position=85751118 | |end_of_center_position=85751118 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23362 | |hgnc_mgi_id=HGNC:23362 | ||
|nearest_ensembl=ENSG00000154102 | |nearest_ensembl=ENSG00000154102 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_161452 |
|nearest_refseq=NM_206967 | |nearest_refseq=NM_206967 | ||
|nearest_unigene=Hs.461655 | |nearest_unigene=Hs.461655 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=85751113 | |start=85751113 | ||
|start_of_center_position=85751117 | |start_of_center_position=85751117 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000602766 | + | |transcript_name=ENST00000602766.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_158414.1 | |tss_id=hg_158414.1 | ||
Revision as of 14:42, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 85751117 |
|---|---|
| End of the center position in the TSS region: | 85751118 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000602766.1 |
|---|---|
| Distance: | 2 |
| Num_trans: | 12 |
| All_trans: | ENST00000602766.1:2 ENST00000602719.5:-7 ENST00000602914.1:9 AB115765:11 ENST00000284245.9:18 NM_206967:18 NR_161454:18 NR_161453:18 NR_161452:18 AB115764:45 ENST00000602758.1:104 ENST00000602675.5:163 |
TATA-Box annotation
| Distance to TSS: | -22 |
|---|---|
| Nearest PromoterID: | NR_161452 |
| Entrez ID: | 404550 |
| Nearest Unigene: | Hs.461655 |
| Nearest Refseq: | NM_206967 |
| Nearest Ensembl: | ENSG00000154102 |
| Gene Name: | chromosome 16 open reading frame 74 |
| Gene Alias: | - |
| Gene Description: | chromosome 16 open reading frame 74 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
