Difference between revisions of "TSS:Hg 158415.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000602719.5 | + | |all_trans=ENST00000602719.5:0 ENST00000602766.1:17 ENST00000602914.1:24 AB115765:26 ENST00000284245.9:33 NM_206967:33 NR_161454:33 NR_161453:33 NR_161452:33 AB115764:60 ENST00000602758.1:119 ENST00000602675.5:178 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-40 |
|end=85751143 | |end=85751143 | ||
|end_of_center_position=85751136 | |end_of_center_position=85751136 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23362 | |hgnc_mgi_id=HGNC:23362 | ||
|nearest_ensembl=ENSG00000154102 | |nearest_ensembl=ENSG00000154102 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_161452 |
|nearest_refseq=NM_206967 | |nearest_refseq=NM_206967 | ||
|nearest_unigene=Hs.461655 | |nearest_unigene=Hs.461655 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=85751128 | |start=85751128 | ||
|start_of_center_position=85751135 | |start_of_center_position=85751135 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000602719.5 | + | |transcript_name=ENST00000602719.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_158415.1 | |tss_id=hg_158415.1 | ||
Revision as of 14:42, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 85751135 |
|---|---|
| End of the center position in the TSS region: | 85751136 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000602719.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000602719.5:0 ENST00000602766.1:17 ENST00000602914.1:24 AB115765:26 ENST00000284245.9:33 NM_206967:33 NR_161454:33 NR_161453:33 NR_161452:33 AB115764:60 ENST00000602758.1:119 ENST00000602675.5:178 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NR_161452 |
| Entrez ID: | 404550 |
| Nearest Unigene: | Hs.461655 |
| Nearest Refseq: | NM_206967 |
| Nearest Ensembl: | ENSG00000154102 |
| Gene Name: | chromosome 16 open reading frame 74 |
| Gene Alias: | - |
| Gene Description: | chromosome 16 open reading frame 74 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
