Difference between revisions of "TSS:Hg 68990.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000607332.2:0 ENST00000623858.2:0 BX647075:0 ENST00000651400.1:14 ENST00000652704.1:29 ENST00000452647.3:45 NM_001195131:45 ENST00000636394.1:71 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=thiosulfate sulfurtransferase | + | |gene_description=thiosulfate sulfurtransferase like domain containing 3 |
|gene_id=100130890 | |gene_id=100130890 | ||
| − | |gene_name=thiosulfate sulfurtransferase | + | |gene_name=thiosulfate sulfurtransferase like domain containing 3 |
|gene_source=HGNC:40910 | |gene_source=HGNC:40910 | ||
|gene_symbol=TSTD3 | |gene_symbol=TSTD3 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:40910 | |hgnc_mgi_id=HGNC:40910 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000279170 |
|nearest_promoter_id=NM_001195131 | |nearest_promoter_id=NM_001195131 | ||
|nearest_refseq=NM_001195131 | |nearest_refseq=NM_001195131 | ||
|nearest_unigene=Hs.634506 | |nearest_unigene=Hs.634506 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=99520968 | |start=99520968 | ||
|start_of_center_position=99520986 | |start_of_center_position=99520986 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-76(GCCTTTAAAGTT,+,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000607332.2 ENST00000623858.2 BX647075 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_68990.1 | |tss_id=hg_68990.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 10:14, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 99520986 |
|---|---|
| End of the center position in the TSS region: | 99520987 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000607332.2 ENST00000623858.2 BX647075 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000607332.2:0 ENST00000623858.2:0 BX647075:0 ENST00000651400.1:14 ENST00000652704.1:29 ENST00000452647.3:45 NM_001195131:45 ENST00000636394.1:71 |
TATA-Box annotation
| Distance to TSS: | -8 |
|---|---|
| Nearest PromoterID: | NM_001195131 |
| Entrez ID: | 100130890 |
| Nearest Unigene: | Hs.634506 |
| Nearest Refseq: | NM_001195131 |
| Nearest Ensembl: | ENSG00000279170 |
| Gene Name: | thiosulfate sulfurtransferase like domain containing 3 |
| Gene Alias: | - |
| Gene Description: | thiosulfate sulfurtransferase like domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -76(GCCTTTAAAGTT,+,0.00) |
