Difference between revisions of "TSS:Hg 69762.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TTMA= | |TTMA= | ||
|TTMC= | |TTMC= | ||
| − | |all_trans=ENST00000617887.4:165 NM_001258276 | + | |all_trans=ENST00000296978.4:-83 NM_001258277:-83 ENST00000617887.4:165 NM_001258276:165 AK315824:269 BC044246:346 AB067500:-366 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=-83 |
|distance_to_tss=-173 | |distance_to_tss=-173 | ||
|end=130366116 | |end=130366116 | ||
| Line 11: | Line 11: | ||
|entrez_id=114801 | |entrez_id=114801 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=KIAA1913 | + | |gene_alias=KIAA1913{{!}}TTMA{{!}}TTMC |
|gene_description=transmembrane protein 200A | |gene_description=transmembrane protein 200A | ||
|gene_id=114801 | |gene_id=114801 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_052913 | |nearest_refseq=NM_052913 | ||
|nearest_unigene=Hs.591341 | |nearest_unigene=Hs.591341 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=130366099 | |start=130366099 | ||
|start_of_center_position=130366107 | |start_of_center_position=130366107 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000296978.4 NM_001258277 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_69762.1 | |tss_id=hg_69762.1 | ||
Revision as of 10:32, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 130366107 |
|---|---|
| End of the center position in the TSS region: | 130366108 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000296978.4 NM_001258277 |
|---|---|
| Distance: | -83 |
| Num_trans: | 7 |
| All_trans: | ENST00000296978.4:-83 NM_001258277:-83 ENST00000617887.4:165 NM_001258276:165 AK315824:269 BC044246:346 AB067500:-366 |
TATA-Box annotation
| Distance to TSS: | -173 |
|---|---|
| Nearest PromoterID: | NM_001258277 |
| Entrez ID: | 114801 |
| Nearest Unigene: | Hs.591341 |
| Nearest Refseq: | NM_052913 |
| Nearest Ensembl: | ENSG00000164484 |
| Gene Name: | transmembrane protein 200A |
| Gene Alias: | KIAA1913|TTMA|TTMC |
| Gene Description: | transmembrane protein 200A |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
