Difference between revisions of "TSS:Hg 236394.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000414263.5:137 AK025604:137 LF326025:-225 MA561602:-225 LF326024:-362 MA561601:-362 BC050323:382 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=137 |
| − | |distance_to_tss= | + | |distance_to_tss=3014 |
|end=75204151 | |end=75204151 | ||
|end_of_center_position=17165410 | |end_of_center_position=17165410 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=chymotrypsinogen B2 | |gene_description=chymotrypsinogen B2 | ||
| − | |gene_name= | + | |gene_id=23164 |
| + | |gene_name=myosin phosphatase Rho interacting protein | ||
| + | |gene_source=HGNC:30321 | ||
| + | |gene_symbol=MPRIP | ||
| + | |gene_synonyms=M-RIP RHOIP3 p116Rip | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30321 | ||
|nearest_ensembl=ENSG00000168928 | |nearest_ensembl=ENSG00000168928 | ||
|nearest_promoter_id=NM_001025200 | |nearest_promoter_id=NM_001025200 | ||
|nearest_refseq=NM_001025200 | |nearest_refseq=NM_001025200 | ||
|nearest_unigene=Hs.610926 | |nearest_unigene=Hs.610926 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=75204143 | |start=75204143 | ||
|start_of_center_position=17165409 | |start_of_center_position=17165409 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000414263.5 AK025604 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_236394.1 | |tss_id=hg_236394.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=H0Y7E2 | ||
}} | }} | ||
Revision as of 13:55, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17165409 |
|---|---|
| End of the center position in the TSS region: | 17165410 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000414263.5 AK025604 |
|---|---|
| Distance: | 137 |
| Num_trans: | 7 |
| All_trans: | ENST00000414263.5:137 AK025604:137 LF326025:-225 MA561602:-225 LF326024:-362 MA561601:-362 BC050323:382 |
TATA-Box annotation
| Distance to TSS: | 3014 |
|---|---|
| Nearest PromoterID: | NM_001025200 |
| Entrez ID: | 440387 |
| Nearest Unigene: | Hs.610926 |
| Nearest Refseq: | NM_001025200 |
| Nearest Ensembl: | ENSG00000168928 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | - |
| Gene Description: | chymotrypsinogen B2 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
