Difference between revisions of "TSS:Hg 82825.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000460438.5 | + | |all_trans=ENST00000460438.5:16 KJ891126:62 EU446473:66 AB463032:66 U17163:67 LF332455:78 MA568032:78 BC106762:-238 BC106763:-238 ENST00000405358.8:246 ENST00000483075.1:-465 AB209202:-490 ENST00000430479.6:-492 ENST00000433547.1:-492 NM_004956:-492 NM_001370556:-492 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=16 | |distance=16 | ||
| − | |distance_to_tss= | + | |distance_to_tss=520 |
|end=13989174 | |end=13989174 | ||
|end_of_center_position=13989147 | |end_of_center_position=13989147 | ||
| Line 12: | Line 12: | ||
|gene_description=ETS variant 1 | |gene_description=ETS variant 1 | ||
|gene_id=2115 | |gene_id=2115 | ||
| − | |gene_name=ETS variant 1 | + | |gene_name=ETS variant transcription factor 1 |
|gene_source=HGNC:3490 | |gene_source=HGNC:3490 | ||
|gene_symbol=ETV1 | |gene_symbol=ETV1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:3490 | |hgnc_mgi_id=HGNC:3490 | ||
|nearest_ensembl=ENSG00000006468 | |nearest_ensembl=ENSG00000006468 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370556 |
|nearest_refseq=NM_004956 | |nearest_refseq=NM_004956 | ||
|nearest_unigene=Hs.22634 | |nearest_unigene=Hs.22634 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=13989118 | |start=13989118 | ||
|start_of_center_position=13989146 | |start_of_center_position=13989146 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000460438.5 | + | |transcript_name=ENST00000460438.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_82825.1 | |tss_id=hg_82825.1 | ||
Revision as of 15:37, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 13989146 |
|---|---|
| End of the center position in the TSS region: | 13989147 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000460438.5 |
|---|---|
| Distance: | 16 |
| Num_trans: | 16 |
| All_trans: | ENST00000460438.5:16 KJ891126:62 EU446473:66 AB463032:66 U17163:67 LF332455:78 MA568032:78 BC106762:-238 BC106763:-238 ENST00000405358.8:246 ENST00000483075.1:-465 AB209202:-490 ENST00000430479.6:-492 ENST00000433547.1:-492 NM_004956:-492 NM_001370556:-492 |
TATA-Box annotation
| Distance to TSS: | 520 |
|---|---|
| Nearest PromoterID: | NM_001370556 |
| Entrez ID: | 2115 |
| Nearest Unigene: | Hs.22634 |
| Nearest Refseq: | NM_004956 |
| Nearest Ensembl: | ENSG00000006468 |
| Gene Name: | ETS variant transcription factor 1 |
| Gene Alias: | ER81 |
| Gene Description: | ETS variant 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
