Difference between revisions of "TSS:Hg 242511.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=145 | |distance_to_tss=145 | ||
|end=13991095 | |end=13991095 | ||
| Line 12: | Line 12: | ||
|gene_description=ETS variant 1 | |gene_description=ETS variant 1 | ||
|gene_id=2115 | |gene_id=2115 | ||
| − | |gene_name= | + | |gene_name=ETV1 |
|gene_source=HGNC:3490 | |gene_source=HGNC:3490 | ||
|gene_symbol=ETV1 | |gene_symbol=ETV1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_004956 | |nearest_refseq=NM_004956 | ||
|nearest_unigene=Hs.22634 | |nearest_unigene=Hs.22634 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=13991094 | |start=13991094 | ||
|start_of_center_position=90403488 | |start_of_center_position=90403488 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_242511.1 | |tss_id=hg_242511.1 | ||
Revision as of 16:17, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 90403488 |
|---|---|
| End of the center position in the TSS region: | 90403489 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | NM_001163149:-145 ENST00000403685.5:-154 uc064bqf.1:-154 X87175:-154 ENST00000431887.5:-289 uc064bqo.1:-289 ENST00000242066.9:-330 ENST00000421381.5:-330 NM_001163148:-330 uc064bqa.1:-330 uc064bqn.1:-330 NR_120445:393 ENST00000443137.5:405 uc064bqe.1:405 BC045776:405 AK294755:458 |
TATA-Box annotation
| Distance to TSS: | 145 |
|---|---|
| Nearest PromoterID: | NM_001163149 |
| Entrez ID: | 2115 |
| Nearest Unigene: | Hs.22634 |
| Nearest Refseq: | NM_004956 |
| Nearest Ensembl: | ENSG00000006468 |
| Gene Name: | ETV1 |
| Gene Alias: | ER81 |
| Gene Description: | ETS variant 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
