Difference between revisions of "TSS:Hg 168282.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PTDSR= | |PTDSR= | ||
|PTDSR1= | |PTDSR1= | ||
| − | |all_trans= | + | |all_trans=ENST00000303996.10:-16 ENST00000542934.5:-16 EF527406:-16 EF527407:-16 ENST00000617192.4:-31 ENST00000445478.6:76 AK294816:76 ENST00000397625.9:149 NM_001081461:149 NM_015167:149 BC047003:165 AK021780:179 AK314541:217 ENST00000585429.1:252 AB011157:274 BC066654:274 AB073711:280 KJ893343:280 AB383913:281 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 11: | Line 11: | ||
|entrez_id=23210 | |entrez_id=23210 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=PSR | + | |gene_alias=PSR{{!}}PTDSR{{!}}PTDSR1 |
| − | |gene_description=arginine demethylase and lysine hydroxylase | + | |gene_description=jumonji domain containing 6, arginine demethylase and lysine hydroxylase |
|gene_id=23210 | |gene_id=23210 | ||
| − | |gene_name=jumonji domain containing 6 | + | |gene_name=jumonji domain containing 6, arginine demethylase and lysine hydroxylase |
|gene_source=HGNC:19355 | |gene_source=HGNC:19355 | ||
|gene_symbol=JMJD6 | |gene_symbol=JMJD6 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_015167 | |nearest_refseq=NM_015167 | ||
|nearest_unigene=Hs.514505 | |nearest_unigene=Hs.514505 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=76726754 | |start=76726754 | ||
|start_of_center_position=76726761 | |start_of_center_position=76726761 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000303996.10 ENST00000542934.5 EF527406 EF527407 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_168282.1 | |tss_id=hg_168282.1 | ||
Revision as of 18:29, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 76726761 |
|---|---|
| End of the center position in the TSS region: | 76726762 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000303996.10 ENST00000542934.5 EF527406 EF527407 |
|---|---|
| Distance: | -16 |
| Num_trans: | 19 |
| All_trans: | ENST00000303996.10:-16 ENST00000542934.5:-16 EF527406:-16 EF527407:-16 ENST00000617192.4:-31 ENST00000445478.6:76 AK294816:76 ENST00000397625.9:149 NM_001081461:149 NM_015167:149 BC047003:165 AK021780:179 AK314541:217 ENST00000585429.1:252 AB011157:274 BC066654:274 AB073711:280 KJ893343:280 AB383913:281 |
TATA-Box annotation
| Distance to TSS: | 38 |
|---|---|
| Nearest PromoterID: | NM_015167 |
| Entrez ID: | 23210 |
| Nearest Unigene: | Hs.514505 |
| Nearest Refseq: | NM_015167 |
| Nearest Ensembl: | ENSG00000070495 |
| Gene Name: | jumonji domain containing 6, arginine demethylase and lysine hydroxylase |
| Gene Alias: | PSR|PTDSR|PTDSR1 |
| Gene Description: | jumonji domain containing 6, arginine demethylase and lysine hydroxylase |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
