Difference between revisions of "TSS:Hg 168981.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK223068:0 BC017716:0 ENST00000581864.5 | + | |all_trans=AK223068:0 BC017716:0 ENST00000581864.5:-1 ENST00000580437.5:-15 ENST00000583093.5:-16 AK312980:-17 U77643:-18 ENST00000269389.8:-19 ENST00000582290.5:-19 NM_003004:-19 AK223104:-21 ENST00000582563.5:-22 AK290708:-251 ENST00000581691.5:-327 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=32 |
|end=82333747 | |end=82333747 | ||
|end_of_center_position=82333735 | |end_of_center_position=82333735 | ||
|entrez_id=6398 | |entrez_id=6398 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=K12 | + | |gene_alias=K12{{!}}SECTM |
|gene_description=secreted and transmembrane 1 | |gene_description=secreted and transmembrane 1 | ||
|gene_id=6398 | |gene_id=6398 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_003004 | |nearest_refseq=NM_003004 | ||
|nearest_unigene=Hs.558009 | |nearest_unigene=Hs.558009 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=82333721 | |start=82333721 | ||
Revision as of 18:45, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 82333734 |
|---|---|
| End of the center position in the TSS region: | 82333735 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK223068 BC017716 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | AK223068:0 BC017716:0 ENST00000581864.5:-1 ENST00000580437.5:-15 ENST00000583093.5:-16 AK312980:-17 U77643:-18 ENST00000269389.8:-19 ENST00000582290.5:-19 NM_003004:-19 AK223104:-21 ENST00000582563.5:-22 AK290708:-251 ENST00000581691.5:-327 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_003004 |
| Entrez ID: | 6398 |
| Nearest Unigene: | Hs.558009 |
| Nearest Refseq: | NM_003004 |
| Nearest Ensembl: | ENSG00000141574 |
| Gene Name: | secreted and transmembrane 1 |
| Gene Alias: | K12|SECTM |
| Gene Description: | secreted and transmembrane 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
