Difference between revisions of "TSS:Hg 242195.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PPIase= | |PPIase= | ||
|Ptg-10= | |Ptg-10= | ||
| − | |all_trans= | + | |all_trans=AB384168:33 KJ902454:33 ENST00000461883.5:-82 BC132875:-82 BC144190:-82 ENST00000537639.5:-112 NR_134477:-112 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance= | + | |distance=33 |
|distance_to_tss=-28 | |distance_to_tss=-28 | ||
|end=35688972 | |end=35688972 | ||
| Line 14: | Line 14: | ||
|entrez_id=2289 | |entrez_id=2289 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=AIG6 | + | |gene_alias=AIG6{{!}}FKBP51{{!}}FKBP54{{!}}P54{{!}}PPIase{{!}}Ptg-10 |
| − | |gene_description= | + | |gene_description=FKBP prolyl isomerase 5 |
| − | |gene_id= | + | |gene_id=27147 |
| − | |gene_name= | + | |gene_name=DENN domain containing 2A |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:22212 |
| − | |gene_symbol= | + | |gene_symbol=DENND2A |
| − | |gene_synonyms= | + | |gene_synonyms=FAM31D |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:22212 |
|nearest_ensembl=ENSG00000096060 | |nearest_ensembl=ENSG00000096060 | ||
|nearest_promoter_id=NM_004117 | |nearest_promoter_id=NM_004117 | ||
|nearest_refseq=NM_004117 | |nearest_refseq=NM_004117 | ||
|nearest_unigene=Hs.407190 | |nearest_unigene=Hs.407190 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=35688967 | |start=35688967 | ||
|start_of_center_position=140602429 | |start_of_center_position=140602429 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AB384168 KJ902454 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_242195.1 | |tss_id=hg_242195.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:10, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 140602429 |
|---|---|
| End of the center position in the TSS region: | 140602430 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB384168 KJ902454 |
|---|---|
| Distance: | 33 |
| Num_trans: | 7 |
| All_trans: | AB384168:33 KJ902454:33 ENST00000461883.5:-82 BC132875:-82 BC144190:-82 ENST00000537639.5:-112 NR_134477:-112 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_004117 |
| Entrez ID: | 2289 |
| Nearest Unigene: | Hs.407190 |
| Nearest Refseq: | NM_004117 |
| Nearest Ensembl: | ENSG00000096060 |
| Gene Name: | DENN domain containing 2A |
| Gene Alias: | AIG6|FKBP51|FKBP54|P54|PPIase|Ptg-10 |
| Gene Description: | FKBP prolyl isomerase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
