Difference between revisions of "TSS:Hg 172749.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MISP1= | |MISP1= | ||
| − | |all_trans= | + | |all_trans=BC052236:0 BX648389:0 BC042125:7 ENST00000215582.8:-11 NR_135168:-11 NM_173481:-11 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=19 |
|end=751139 | |end=751139 | ||
|end_of_center_position=751131 | |end_of_center_position=751131 | ||
|entrez_id=126353 | |entrez_id=126353 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=C19orf21 | + | |gene_alias=C19orf21{{!}}MISP1 |
|gene_description=mitotic spindle positioning | |gene_description=mitotic spindle positioning | ||
|gene_id=126353 | |gene_id=126353 | ||
| Line 16: | Line 16: | ||
|gene_source=HGNC:27000 | |gene_source=HGNC:27000 | ||
|gene_symbol=MISP | |gene_symbol=MISP | ||
| − | |gene_synonyms=Caprice DKFZp686H18209 | + | |gene_synonyms=Caprice DKFZp686H18209 MISP1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:27000 | |hgnc_mgi_id=HGNC:27000 | ||
|nearest_ensembl=ENSG00000099812 | |nearest_ensembl=ENSG00000099812 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_173481 |
|nearest_refseq=NM_173481 | |nearest_refseq=NM_173481 | ||
|nearest_unigene=Hs.439180 | |nearest_unigene=Hs.439180 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=751122 | |start=751122 | ||
|start_of_center_position=751130 | |start_of_center_position=751130 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC052236 BX648389 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_172749.1 | |tss_id=hg_172749.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 20:12, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 751130 |
|---|---|
| End of the center position in the TSS region: | 751131 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC052236 BX648389 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | BC052236:0 BX648389:0 BC042125:7 ENST00000215582.8:-11 NR_135168:-11 NM_173481:-11 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_173481 |
| Entrez ID: | 126353 |
| Nearest Unigene: | Hs.439180 |
| Nearest Refseq: | NM_173481 |
| Nearest Ensembl: | ENSG00000099812 |
| Gene Name: | mitotic spindle positioning |
| Gene Alias: | C19orf21|MISP1 |
| Gene Description: | mitotic spindle positioning |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
