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Difference between revisions of "TSS:Hg 100543.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000564224.1:0 ENST00000421828.7:0 ENST00000416454.5:0 ENST00000544078.2:0 NR_135148:0 NM_001320038:0 NM_001320037:0 BC037171:0 AK296005:0 BC066358:0 ENST00000423809.5:-46 ENST00000555007.1:492
+
|all_trans=
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 22: Line 22:
 
|nearest_refseq=NM_001320037
 
|nearest_refseq=NM_001320037
 
|nearest_unigene=Hs.459590
 
|nearest_unigene=Hs.459590
|num_trans=12
+
|num_trans=730098
 
|species=human
 
|species=human
 
|start=34665986
 
|start=34665986
 
|start_of_center_position=34666026
 
|start_of_center_position=34666026
 
|strand=-
 
|strand=-
|transcript_name=ENST00000564224.1 ENST00000421828.7 ENST00000416454.5 ENST00000544078.2 NR_135148 NM_001320038 NM_001320037 BC037171 AK296005 BC066358
+
|transcript_name=ENST00000421828.7 ENST00000416454.5 ENST00000544078.2 AK296005 BC066358
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_100543.1
 
|tss_id=hg_100543.1

Latest revision as of 17:45, 19 July 2021

Basic information about the TSS


TSS ID:hg_100543.1
Species:human
Chr:chr9
TSS Classification:yes
Start:34665986
End:34666066
Strand:-
TSS Score:1
Start of the center position in the TSS region:34666026
End of the center position in the TSS region:34666027



Gene and protein annotation


Transcript_name:ENST00000421828.7 ENST00000416454.5 ENST00000544078.2 AK296005 BC066358
Distance:0
GeneID:730098
HGNC/MGI_ID:
UniProt_ID:B7Z3J9 H3BQ31
Gene_name:uncharacterized LOC730098
Gene_symbol:LOC730098
Gene_synonyms:
Gene_source:EntrezGene:730098



Transcript annotation


Transcript_name:ENST00000421828.7 ENST00000416454.5 ENST00000544078.2 AK296005 BC066358
Distance:0
Num_trans:730098
All_trans:



TATA-Box annotation


Distance to TSS:19
Nearest PromoterID:NM_001320038
Entrez ID:730098
Nearest Unigene:Hs.459590
Nearest Refseq:NM_001320037
Nearest Ensembl:ENSG00000187186
Gene Name:uncharacterized LOC730098
Gene Alias:-
Gene Description:uncharacterized LOC730098
Gene Type:protein-coding
CpG%:0.045
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):