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Difference between revisions of "TSS:Hg 100694.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000377877.4:0 AF394047:0 AK093480:0 ENST00000357058.7:-18 ENST00000350199.8:-18 NM_194332:-18 NM_194328:-18 AK097653:239 ENST00000491349.5:-291 ENST00000377885.6:-293 ENST00000484621.1:-293 NM_194330:-293
+
|all_trans=HGNC:18052
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.14
 
|cpg_percent=0.14
Line 22: Line 22:
 
|nearest_refseq=NM_022781
 
|nearest_refseq=NM_022781
 
|nearest_unigene=Hs.333503
 
|nearest_unigene=Hs.333503
|num_trans=12
+
|num_trans=152006
 
|species=human
 
|species=human
 
|start=36400860
 
|start=36400860

Latest revision as of 17:49, 19 July 2021

Basic information about the TSS


TSS ID:hg_100694.1
Species:human
Chr:chr9
TSS Classification:yes
Start:36400860
End:36400905
Strand:-
TSS Score:1
Start of the center position in the TSS region:36400882
End of the center position in the TSS region:36400883



Gene and protein annotation


Transcript_name:ENST00000377877.4 AF394047 AK093480
Distance:0
GeneID:152006
HGNC/MGI_ID:HGNC:18052
UniProt_ID:Q9H0F5
Gene_name:ring finger protein 38
Gene_symbol:RNF38
Gene_synonyms:
Gene_source:HGNC:18052



Transcript annotation


Transcript_name:ENST00000377877.4 AF394047 AK093480
Distance:0
Num_trans:152006
All_trans:HGNC:18052



TATA-Box annotation


Distance to TSS:40
Nearest PromoterID:NM_194332
Entrez ID:152006
Nearest Unigene:Hs.333503
Nearest Refseq:NM_022781
Nearest Ensembl:ENSG00000137075
Gene Name:ring finger protein 38
Gene Alias:-
Gene Description:ring finger protein 38
Gene Type:protein-coding
CpG%:0.14
GC%:0.781095
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):