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Difference between revisions of "TSS:Hg 100444.1"

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Line 4: Line 4:
 
|GT1=
 
|GT1=
 
|GTB=
 
|GTB=
|all_trans=ENST00000535206.5:0 ENST00000379731.5:0 NM_001378497:0 NM_001497:0 NM_001378496:0 BC045773:0 M22921:75 U10474:75 D29805:78 X13223:78 X14085:78 HG765099:108 HG765101:108 AK312797:114 AK296928:125 KJ901453:142 X55415:142 AB590749:142 NM_001378495:152 AK316294:163 U10473:486
+
|all_trans=HGNC:924
 
|beta4Gal-T1=
 
|beta4Gal-T1=
 
|chr=chr9
 
|chr=chr9
Line 27: Line 27:
 
|nearest_refseq=NM_001497
 
|nearest_refseq=NM_001497
 
|nearest_unigene=Hs.272011
 
|nearest_unigene=Hs.272011
|num_trans=21
+
|num_trans=2683
 
|species=human
 
|species=human
 
|start=33167310
 
|start=33167310
 
|start_of_center_position=33167345
 
|start_of_center_position=33167345
 
|strand=-
 
|strand=-
|transcript_name=ENST00000535206.5 ENST00000379731.5 NM_001378497 NM_001497 NM_001378496 BC045773
+
|transcript_name=ENST00000535206.5 ENST00000379731.5 BC045773
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_100444.1
 
|tss_id=hg_100444.1

Latest revision as of 17:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_100444.1
Species:human
Chr:chr9
TSS Classification:yes
Start:33167310
End:33167380
Strand:-
TSS Score:1
Start of the center position in the TSS region:33167345
End of the center position in the TSS region:33167346



Gene and protein annotation


Transcript_name:ENST00000535206.5 ENST00000379731.5 BC045773
Distance:0
GeneID:2683
HGNC/MGI_ID:HGNC:924
UniProt_ID:P15291 Q86XA6
Gene_name:beta-1,4-galactosyltransferase 1
Gene_symbol:B4GALT1
Gene_synonyms:beta4Gal-T1
Gene_source:HGNC:924



Transcript annotation


Transcript_name:ENST00000535206.5 ENST00000379731.5 BC045773
Distance:0
Num_trans:2683
All_trans:HGNC:924



TATA-Box annotation


Distance to TSS:13
Nearest PromoterID:NM_001497
Entrez ID:2683
Nearest Unigene:Hs.272011
Nearest Refseq:NM_001497
Nearest Ensembl:ENSG00000086062
Gene Name:beta-1,4-galactosyltransferase 1
Gene Alias:B4GAL-T1|CDG2D|GGTB2|GT1|GTB|beta4Gal-T1
Gene Description:beta-1,4-galactosyltransferase 1
Gene Type:protein-coding
CpG%:0.125
GC%:0.79602
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):