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Difference between revisions of "TSS:Hg 10131.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000377464.5:-55 AB384483:76 ENST00000464972.5:-143 ENST00000507012.1:-155
+
|all_trans=HGNC:9965
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NR_132752
 
|nearest_refseq=NR_132752
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=4
+
|num_trans=473
 
|species=human
 
|species=human
 
|start=8525860
 
|start=8525860

Latest revision as of 18:02, 19 July 2021

Basic information about the TSS


TSS ID:hg_10131.1
Species:human
Chr:chr1
TSS Classification:yes
Start:8525860
End:8525884
Strand:-
TSS Score:1
Start of the center position in the TSS region:8525872
End of the center position in the TSS region:8525873



Gene and protein annotation


Transcript_name:ENST00000377464.5
Distance:-55
GeneID:473
HGNC/MGI_ID:HGNC:9965
UniProt_ID:B1AKN3
Gene_name:arginine-glutamic acid dipeptide repeats
Gene_symbol:RERE
Gene_synonyms:ARG ARP ATN2 DNB1 KIAA0458
Gene_source:HGNC:9965



Transcript annotation


Transcript_name:ENST00000377464.5
Distance:-55
Num_trans:473
All_trans:HGNC:9965



TATA-Box annotation


Distance to TSS:-30959
Nearest PromoterID:NR_132752
Entrez ID:106632271
Nearest Unigene:
Nearest Refseq:NR_132752
Nearest Ensembl:
Gene Name:arginine-glutamic acid dipeptide repeats
Gene Alias:ZL43
Gene Description:small nucleolar RNA, C/D box 128
Gene Type:snoRNA
CpG%:0.015
GC%:0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):11(GTGTAGAAAAGG,-,0.00)