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Difference between revisions of "TSS:Hg 101585.1"

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Line 3: Line 3:
 
|RAD26L=
 
|RAD26L=
 
|SR278=
 
|SR278=
|all_trans=ENST00000660143.1:0 ENST00000429781.1:0 ENST00000657579.1:0 ENST00000670189.1:0 AK092137:0 ENST00000433656.2:67 AF170307:67 ENST00000671508.1:86 ENST00000427259.1:277 ENST00000660645.1:-367 ENST00000321517.3:-383 AF194971:-383 NR_023390:-384 NR_023389:-384 AL389954:-384 ENST00000412446.6:-456 LF331872:-463 MA567449:-463 ENST00000669049.1:468 ENST00000448465.1:477
+
|all_trans=HGNC:27858
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 25: Line 25:
 
|nearest_refseq=NM_020207
 
|nearest_refseq=NM_020207
 
|nearest_unigene=Hs.432364
 
|nearest_unigene=Hs.432364
|num_trans=20
+
|num_trans=100128782
 
|species=human
 
|species=human
 
|start=95875546
 
|start=95875546

Latest revision as of 18:08, 19 July 2021

Basic information about the TSS


TSS ID:hg_101585.1
Species:human
Chr:chr9
TSS Classification:yes
Start:95875546
End:95875593
Strand:-
TSS Score:1
Start of the center position in the TSS region:95875569
End of the center position in the TSS region:95875570



Gene and protein annotation


Transcript_name:ENST00000660143.1 ENST00000429781.1 ENST00000657579.1 ENST00000670189.1 AK092137
Distance:0
GeneID:100128782
HGNC/MGI_ID:HGNC:27858
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 476
Gene_symbol:LINC00476
Gene_synonyms:
Gene_source:HGNC:27858



Transcript annotation


Transcript_name:ENST00000660143.1 ENST00000429781.1 ENST00000657579.1 ENST00000670189.1 AK092137
Distance:0
Num_trans:100128782
All_trans:HGNC:27858



TATA-Box annotation


Distance to TSS:-121
Nearest PromoterID:NM_020207
Entrez ID:375748
Nearest Unigene:Hs.432364
Nearest Refseq:NM_020207
Nearest Ensembl:ENSG00000182150
Gene Name:long intergenic non-protein coding RNA 476
Gene Alias:BMFS2|C9orf102|RAD26L|SR278
Gene Description:ERCC excision repair 6 like 2
Gene Type:protein-coding
CpG%:0.095
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):