Difference between revisions of "TSS:Hg 101902.1"
From referenceTSS
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|tata_box=89(TTATTTAAAAGC,-,0.00) | |tata_box=89(TTATTTAAAAGC,-,0.00) | ||
| − | |transcript_name=NM_001145372 | + | |transcript_name=NM_001145371.2 NM_001145372.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101902.1 | |tss_id=hg_101902.1 | ||
Latest revision as of 18:15, 19 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 109429011 |
|---|---|
| End of the center position in the TSS region: | 109429012 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001145371.2 NM_001145372.2 |
|---|---|
| Distance: | 38 |
| Num_trans: | 5 |
| All_trans: | NM_001145372:38 NM_001145371:38 AK316118:41 AK296388:41 AK296265:184 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NM_001145372 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Alias: | PTP-H1|PTPH1 |
| Gene Description: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 89(TTATTTAAAAGC,-,0.00) |
