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Difference between revisions of "TSS:Hg 101927.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|TRX6=
 
|TRX6=
|all_trans=ENST00000423740.7:0 NM_001286946:0 NM_001003936:0 NM_001364963:0 ENST00000374507.4:11 BC035743:13 ENST00000374511.7:-17 NM_001286947:-17 ENST00000374510.8:50 BC130549:50 BC130551:50 BC144461:50 AF305830:53 HQ258720:61 KJ895911:61
+
|all_trans=HGNC:31454
 
|bA427L11.2=
 
|bA427L11.2=
 
|chr=chr9
 
|chr=chr9
Line 24: Line 24:
 
|nearest_refseq=NM_001003936
 
|nearest_refseq=NM_001003936
 
|nearest_unigene=Hs.147064
 
|nearest_unigene=Hs.147064
|num_trans=15
+
|num_trans=255220
 
|species=human
 
|species=human
 
|start=110337857
 
|start=110337857
 
|start_of_center_position=110337862
 
|start_of_center_position=110337862
 
|strand=-
 
|strand=-
|transcript_name=ENST00000423740.7 NM_001286946 NM_001003936 NM_001364963
+
|transcript_name=ENST00000423740.7
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_101927.1
 
|tss_id=hg_101927.1

Latest revision as of 18:15, 19 July 2021

Basic information about the TSS


TSS ID:hg_101927.1
Species:human
Chr:chr9
TSS Classification:no
Start:110337857
End:110337867
Strand:-
TSS Score:1
Start of the center position in the TSS region:110337862
End of the center position in the TSS region:110337863



Gene and protein annotation


Transcript_name:ENST00000423740.7
Distance:0
GeneID:255220
HGNC/MGI_ID:HGNC:31454
UniProt_ID:B7ZME0 Q6A555
Gene_name:thioredoxin domain containing 8
Gene_symbol:TXNDC8
Gene_synonyms:SPTRX-3 TRX6 bA427L11.2
Gene_source:HGNC:31454



Transcript annotation


Transcript_name:ENST00000423740.7
Distance:0
Num_trans:255220
All_trans:HGNC:31454



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_001364963
Entrez ID:255220
Nearest Unigene:Hs.147064
Nearest Refseq:NM_001003936
Nearest Ensembl:ENSG00000204193
Gene Name:thioredoxin domain containing 8
Gene Alias:SPTRX-3|SPTRX3|TRX6|bA427L11.2
Gene Description:thioredoxin domain containing 8
Gene Type:protein-coding
CpG%:0.005
GC%:0.39801
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):