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Difference between revisions of "TSS:Hg 102240.1"

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{{TSSDetail
 
{{TSSDetail
 
|EST-YD1=
 
|EST-YD1=
|all_trans=ENST00000374014.3:348 NR_024032:348 AB021923:348 BC029369:426 BC104240:457 BC112996:457 BC112997:457 BC128039:457 BC104241:458
+
|all_trans=HGNC:23367
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0
 
|cpg_percent=0
Line 23: Line 23:
 
|nearest_refseq=NR_024032
 
|nearest_refseq=NR_024032
 
|nearest_unigene=Hs.23367
 
|nearest_unigene=Hs.23367
|num_trans=9
+
|num_trans=58483
 
|species=human
 
|species=human
 
|start=115925554
 
|start=115925554
 
|start_of_center_position=115925563
 
|start_of_center_position=115925563
 
|strand=-
 
|strand=-
|transcript_name=ENST00000374014.3 NR_024032 AB021923
+
|transcript_name=ENST00000374014.3 AB021923
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=hg_102240.1
 
|tss_id=hg_102240.1

Latest revision as of 18:22, 19 July 2021

Basic information about the TSS


TSS ID:hg_102240.1
Species:human
Chr:chr9
TSS Classification:no
Start:115925554
End:115925573
Strand:-
TSS Score:1
Start of the center position in the TSS region:115925563
End of the center position in the TSS region:115925564



Gene and protein annotation


Transcript_name:ENST00000374014.3 AB021923
Distance:348
GeneID:58483
HGNC/MGI_ID:HGNC:23367
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 474
Gene_symbol:LINC00474
Gene_synonyms:EST-YD1
Gene_source:HGNC:23367



Transcript annotation


Transcript_name:ENST00000374014.3 AB021923
Distance:348
Num_trans:58483
All_trans:HGNC:23367



TATA-Box annotation


Distance to TSS:-357
Nearest PromoterID:NR_024032
Entrez ID:58483
Nearest Unigene:Hs.23367
Nearest Refseq:NR_024032
Nearest Ensembl:ENSG00000204148
Gene Name:long intergenic non-protein coding RNA 474
Gene Alias:C9orf27|EST-YD1
Gene Description:long intergenic non-protein coding RNA 474
Gene Type:ncRNA
CpG%:0
GC%:0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):