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Difference between revisions of "TSS:Hg 10325.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000418034.1:0 AY046564:0 BC053509:1 ENST00000376590.9:-16 NM_005957:-16 AK312907:-16 ENST00000641446.1:-54 ENST00000641437.1:-58 ENST00000376486.3:-115 ENST00000642002.1:-155 LF357340:415 MA592917:415
+
|all_trans=HGNC:7436
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.115
 
|cpg_percent=0.115
Line 22: Line 22:
 
|nearest_refseq=NM_001286
 
|nearest_refseq=NM_001286
 
|nearest_unigene=Hs.193043
 
|nearest_unigene=Hs.193043
|num_trans=12
+
|num_trans=4524
 
|species=human
 
|species=human
 
|start=11805925
 
|start=11805925

Latest revision as of 18:44, 19 July 2021

Basic information about the TSS


TSS ID:hg_10325.1
Species:human
Chr:chr1
TSS Classification:yes
Start:11805925
End:11805948
Strand:-
TSS Score:1
Start of the center position in the TSS region:11805936
End of the center position in the TSS region:11805937



Gene and protein annotation


Transcript_name:ENST00000418034.1 AY046564
Distance:0
GeneID:4524
HGNC/MGI_ID:HGNC:7436
UniProt_ID:Q5SNW5
Gene_name:methylenetetrahydrofolate reductase
Gene_symbol:MTHFR
Gene_synonyms:
Gene_source:HGNC:7436



Transcript annotation


Transcript_name:ENST00000418034.1 AY046564
Distance:0
Num_trans:4524
All_trans:HGNC:7436



TATA-Box annotation


Distance to TSS:-159
Nearest PromoterID:NM_001256959
Entrez ID:1185
Nearest Unigene:Hs.193043
Nearest Refseq:NM_001286
Nearest Ensembl:ENSG00000011021
Gene Name:methylenetetrahydrofolate reductase
Gene Alias:CLC-6
Gene Description:chloride voltage-gated channel 6
Gene Type:protein-coding
CpG%:0.115
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):