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Difference between revisions of "TSS:Hg 104052.1"

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{{TSSDetail
 
{{TSSDetail
 
|HEL113=
 
|HEL113=
|all_trans=ENST00000478746.1:10 BC066956:-10 LF211788:-187 MA447365:-187 LQ740465:-222 ENST00000544301.7:-240 NM_003380:-240 ENST00000497849.1:364 LF205547:415 MA441124:415
+
|all_trans=HGNC:12692
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 23: Line 23:
 
|nearest_refseq=NM_003380
 
|nearest_refseq=NM_003380
 
|nearest_unigene=Hs.455493
 
|nearest_unigene=Hs.455493
|num_trans=10
+
|num_trans=7431
 
|species=human
 
|species=human
 
|start=17228480
 
|start=17228480

Latest revision as of 19:01, 19 July 2021

Basic information about the TSS


TSS ID:hg_104052.1
Species:human
Chr:chr10
TSS Classification:yes
Start:17228480
End:17228505
Strand:+
TSS Score:1
Start of the center position in the TSS region:17228492
End of the center position in the TSS region:17228493



Gene and protein annotation


Transcript_name:ENST00000478746.1
Distance:10
GeneID:7431
HGNC/MGI_ID:HGNC:12692
UniProt_ID:A0A1B0GTT5
Gene_name:vimentin
Gene_symbol:VIM
Gene_synonyms:
Gene_source:HGNC:12692



Transcript annotation


Transcript_name:ENST00000478746.1
Distance:10
Num_trans:7431
All_trans:HGNC:12692



TATA-Box annotation


Distance to TSS:252
Nearest PromoterID:NM_003380
Entrez ID:7431
Nearest Unigene:Hs.455493
Nearest Refseq:NM_003380
Nearest Ensembl:ENSG00000026025
Gene Name:vimentin
Gene Alias:-
Gene Description:vimentin
Gene Type:protein-coding
CpG%:0.085
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):