Personal tools

Difference between revisions of "TSS:Hg 10410.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=BC016048:0 ENST00000376085.4:-322 NM_001010847:-322 LP895739:-367
+
|all_trans=HGNC:27005
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.17
 
|cpg_percent=0.17
Line 22: Line 22:
 
|nearest_refseq=NM_001010847
 
|nearest_refseq=NM_001010847
 
|nearest_unigene=Hs.657356
 
|nearest_unigene=Hs.657356
|num_trans=4
+
|num_trans=126755
 
|species=human
 
|species=human
 
|start=13513662
 
|start=13513662

Latest revision as of 19:02, 19 July 2021

Basic information about the TSS


TSS ID:hg_10410.1
Species:human
Chr:chr1
TSS Classification:yes
Start:13513662
End:13513681
Strand:-
TSS Score:1
Start of the center position in the TSS region:13513671
End of the center position in the TSS region:13513672



Gene and protein annotation


Transcript_name:BC016048
Distance:0
GeneID:126755
HGNC/MGI_ID:HGNC:27005
UniProt_ID:
Gene_name:leucine rich repeat containing 38
Gene_symbol:LRRC38
Gene_synonyms:
Gene_source:HGNC:27005



Transcript annotation


Transcript_name:BC016048
Distance:0
Num_trans:126755
All_trans:HGNC:27005



TATA-Box annotation


Distance to TSS:331
Nearest PromoterID:NM_001010847
Entrez ID:126755
Nearest Unigene:Hs.657356
Nearest Refseq:NM_001010847
Nearest Ensembl:ENSG00000162494
Gene Name:leucine rich repeat containing 38
Gene Alias:-
Gene Description:leucine rich repeat containing 38
Gene Type:protein-coding
CpG%:0.17
GC%:0.835821
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):